RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 PPBPP02775 128 aa8.73□□□□□ -1.01
SENP3-209ENST00000610454 UQCC3Q6UW78 93 aa8.73□□□□□ -1.01
SENP3-209ENST00000610454 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
SENP3-209ENST00000610454 TMEM18Q96B42 140 aa8.73□□□□□ -1.01
SENP3-209ENST00000610454 TNFRSF6BO95407 300 aa8.72□□□□□ -1.01
SENP3-209ENST00000610454 Q6ZSA8 131 aa8.72□□□□□ -1.01
SENP3-209ENST00000610454 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
SENP3-209ENST00000610454 TRBV24-1A0A075B6N3 115 aa8.71□□□□□ -1.02
SENP3-209ENST00000610454 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.71□□□□□ -1.02
SENP3-209ENST00000610454 SS18Q15532 418 aa8.71□□□□□ -1.02
SENP3-209ENST00000610454 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
SENP3-209ENST00000610454 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.02
SENP3-209ENST00000610454 PHOX2AO14813 284 aa8.7□□□□□ -1.02
SENP3-209ENST00000610454 XCL1P47992 114 aa8.7□□□□□ -1.02
SENP3-209ENST00000610454 RPL32P62910 135 aaKnown RBP8.7□□□□□ -1.02
SENP3-209ENST00000610454 IFITM2Q01629 132 aa8.7□□□□□ -1.02
SENP3-209ENST00000610454 ZNF664Q8N3J9 261 aa8.7□□□□□ -1.02
SENP3-209ENST00000610454 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
SENP3-209ENST00000610454 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 CCL25O15444 150 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 NPYP01303 97 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 TMEM136Q6ZRR5 245 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 SCXQ7RTU7 201 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 PRELID3AQ96N28 172 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 CHAC1Q9BUX1 264 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
SENP3-209ENST00000610454 TMEM218A2RU14 115 aa8.68□□□□□ -1.02
SENP3-209ENST00000610454 RAB5AP20339 215 aa8.68□□□□□ -1.02
SENP3-209ENST00000610454 CNBPP62633 177 aaKnown RBP8.68□□□□□ -1.02
SENP3-209ENST00000610454 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
SENP3-209ENST00000610454 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
SENP3-209ENST00000610454 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 COMMD7Q86VX2 200 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
SENP3-209ENST00000610454 C1orf196B1AJZ1 125 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 FOXI1Q12951 378 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 TIMM21Q9BVV7 248 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 CTDSP1Q9GZU7 261 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 MAP1LC3AQ9H492 121 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 LAMTOR2Q9Y2Q5 125 aa8.66□□□□□ -1.02
SENP3-209ENST00000610454 ADCYAP1P18509 176 aa8.65□□□□□ -1.02
SENP3-209ENST00000610454 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
SENP3-209ENST00000610454 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
SENP3-209ENST00000610454 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
SENP3-209ENST00000610454 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
SENP3-209ENST00000610454 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.03
SENP3-209ENST00000610454 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 MALP21145 153 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 S100PP25815 95 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
SENP3-209ENST00000610454 Q6ZUT4 128 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
SENP3-209ENST00000610454 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
SENP3-209ENST00000610454 LOC389332A0A1B0GUA5 103 aa8.63□□□□□ -1.03
SENP3-209ENST00000610454 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
SENP3-209ENST00000610454 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
SENP3-209ENST00000610454 COX7A2LO14548 114 aa8.62□□□□□ -1.03
SENP3-209ENST00000610454 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
SENP3-209ENST00000610454 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
SENP3-209ENST00000610454 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
SENP3-209ENST00000610454 IFITM10A6NMD0 228 aa8.6□□□□□ -1.03
SENP3-209ENST00000610454 APOMO95445 188 aa8.6□□□□□ -1.03
SENP3-209ENST00000610454 SLPIP03973 132 aa8.6□□□□□ -1.03
SENP3-209ENST00000610454 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
SENP3-209ENST00000610454 Q8N8P6 123 aa8.6□□□□□ -1.03
SENP3-209ENST00000610454 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
SENP3-209ENST00000610454 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
SENP3-209ENST00000610454 ORMDL2Q53FV1 153 aa8.59□□□□□ -1.03
SENP3-209ENST00000610454 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
SENP3-209ENST00000610454 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
SENP3-209ENST00000610454 FAT1Q14517 4588 aa8.59□□□□□ -1.03
SENP3-209ENST00000610454 K7EMI3 77 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 COX6A2Q02221 97 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 RHEBQ15382 184 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 Q6ZN92 141 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
SENP3-209ENST00000610454 DNAH8Q96JB1 4490 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 CHTF8P0CG12 524 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 G0S2P27469 103 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 COX19Q49B96 90 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 TMEM141Q96I45 108 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
SENP3-209ENST00000610454 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
SENP3-209ENST00000610454 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
SENP3-209ENST00000610454 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 PANO1I0J062 215 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms