RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
SRSF4-206ENST00000605204 D6R8Y8 96 aa12.56□□□□□ -0.4
SRSF4-206ENST00000605204 TNFRSF6BO95407 300 aa12.56□□□□□ -0.4
SRSF4-206ENST00000605204 Q6ZSA8 131 aa12.56□□□□□ -0.4
SRSF4-206ENST00000605204 ORMDL3Q8N138 153 aa12.56□□□□□ -0.4
SRSF4-206ENST00000605204 CSDC2Q9Y534 153 aaKnown RBP12.56□□□□□ -0.4
SRSF4-206ENST00000605204 DMBT1Q9UGM3 2413 aaPredicted RBP12.55□□□□□ -0.4
SRSF4-206ENST00000605204 SEC11CQ9BY50 192 aa12.55□□□□□ -0.4
SRSF4-206ENST00000605204 CTDSP1Q9GZU7 261 aa12.55□□□□□ -0.4
SRSF4-206ENST00000605204 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
SRSF4-206ENST00000605204 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
SRSF4-206ENST00000605204 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
SRSF4-206ENST00000605204 ADCYAP1P18509 176 aa12.53□□□□□ -0.4
SRSF4-206ENST00000605204 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
SRSF4-206ENST00000605204 PRSS1P07477 247 aa12.52□□□□□ -0.41
SRSF4-206ENST00000605204 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
SRSF4-206ENST00000605204 CHCHD10Q8WYQ3 142 aaPredicted RBP12.52□□□□□ -0.41
SRSF4-206ENST00000605204 TIMM21Q9BVV7 248 aa12.52□□□□□ -0.41
SRSF4-206ENST00000605204 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.41
SRSF4-206ENST00000605204 TRAV9-1A0A075B6T8 112 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 CCL25O15444 150 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 TMEM136Q6ZRR5 245 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 ZNF664Q8N3J9 261 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
SRSF4-206ENST00000605204 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
SRSF4-206ENST00000605204 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
SRSF4-206ENST00000605204 PRELID3AQ96N28 172 aa12.5□□□□□ -0.41
SRSF4-206ENST00000605204 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.49□□□□□ -0.41
SRSF4-206ENST00000605204 NPYP01303 97 aa12.49□□□□□ -0.41
SRSF4-206ENST00000605204 SS18Q15532 418 aa12.49□□□□□ -0.41
SRSF4-206ENST00000605204 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
SRSF4-206ENST00000605204 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
SRSF4-206ENST00000605204 hDV102S1A0JD36 115 aa12.48□□□□□ -0.41
SRSF4-206ENST00000605204 C9orf163Q8N9P6 203 aa12.48□□□□□ -0.41
SRSF4-206ENST00000605204 FAM30AQ9NZY2 134 aa12.48□□□□□ -0.41
SRSF4-206ENST00000605204 RAB5AP20339 215 aa12.47□□□□□ -0.41
SRSF4-206ENST00000605204 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
SRSF4-206ENST00000605204 PRSS47A8MTI9 375 aa12.46□□□□□ -0.41
SRSF4-206ENST00000605204 FAM229AH3BQW9 127 aa12.46□□□□□ -0.41
SRSF4-206ENST00000605204 S100PP25815 95 aa12.46□□□□□ -0.41
SRSF4-206ENST00000605204 MAP1LC3AQ9H492 121 aa12.46□□□□□ -0.41
SRSF4-206ENST00000605204 DNAH8Q96JB1 4490 aa12.46□□□□□ -0.41
SRSF4-206ENST00000605204 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
SRSF4-206ENST00000605204 XCL1P47992 114 aa12.45□□□□□ -0.42
SRSF4-206ENST00000605204 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
SRSF4-206ENST00000605204 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
SRSF4-206ENST00000605204 CHAC1Q9BUX1 264 aa12.45□□□□□ -0.42
SRSF4-206ENST00000605204 FLG2Q5D862 2391 aaPredicted RBP12.45□□□□□ -0.42
SRSF4-206ENST00000605204 K7EMI3 77 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 FOXI1Q12951 378 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 RHEBQ15382 184 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 Q5VSD8 79 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
SRSF4-206ENST00000605204 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
SRSF4-206ENST00000605204 GVQW2A0A096LPI5 108 aaPredicted RBP12.43□□□□□ -0.42
SRSF4-206ENST00000605204 IGHV1-58A0A0C4DH39 117 aa12.42□□□□□ -0.42
SRSF4-206ENST00000605204 INAFM2P0DMQ5 153 aa12.42□□□□□ -0.42
SRSF4-206ENST00000605204 HAMPP81172 84 aa12.42□□□□□ -0.42
SRSF4-206ENST00000605204 MRPS36P82909 103 aaKnown RBP12.42□□□□□ -0.42
SRSF4-206ENST00000605204 COX19Q49B96 90 aa12.42□□□□□ -0.42
SRSF4-206ENST00000605204 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
SRSF4-206ENST00000605204 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
SRSF4-206ENST00000605204 Q6ZUT4 128 aa12.41□□□□□ -0.42
SRSF4-206ENST00000605204 PKIGQ9Y2B9 76 aa12.41□□□□□ -0.42
SRSF4-206ENST00000605204 SMR3BP02814 79 aaPredicted RBP12.4□□□□□ -0.42
SRSF4-206ENST00000605204 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
SRSF4-206ENST00000605204 Q8N8P6 123 aa12.4□□□□□ -0.42
SRSF4-206ENST00000605204 NXT2Q9NPJ8 142 aaKnown RBP12.4□□□□□ -0.42
SRSF4-206ENST00000605204 PYGO1Q9Y3Y4 419 aa12.4□□□□□ -0.42
SRSF4-206ENST00000605204 SRRM2Q9UQ35 2752 aaKnown RBP12.39□□□□□ -0.43
SRSF4-206ENST00000605204 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
SRSF4-206ENST00000605204 ORMDL2Q53FV1 153 aa12.39□□□□□ -0.43
SRSF4-206ENST00000605204 SDIM1Q6ZPB5 146 aa12.39□□□□□ -0.43
SRSF4-206ENST00000605204 TRAV13-1A0A0B4J241 112 aa12.38□□□□□ -0.43
SRSF4-206ENST00000605204 COX7A2LO14548 114 aa12.38□□□□□ -0.43
SRSF4-206ENST00000605204 G0S2P27469 103 aa12.38□□□□□ -0.43
SRSF4-206ENST00000605204 NDUFA5Q16718 116 aa12.38□□□□□ -0.43
SRSF4-206ENST00000605204 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
SRSF4-206ENST00000605204 MT-ND6P03923 174 aa12.37□□□□□ -0.43
SRSF4-206ENST00000605204 PLA2G1BP04054 148 aaKnown RBP12.37□□□□□ -0.43
SRSF4-206ENST00000605204 MALP21145 153 aa12.37□□□□□ -0.43
SRSF4-206ENST00000605204 HIGD2BQ4VC39 106 aa12.37□□□□□ -0.43
SRSF4-206ENST00000605204 LOC389332A0A1B0GUA5 103 aa12.36□□□□□ -0.43
SRSF4-206ENST00000605204 NPSP0C0P6 89 aa12.36□□□□□ -0.43
SRSF4-206ENST00000605204 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
SRSF4-206ENST00000605204 CYSLTR1Q9Y271 337 aa12.36□□□□□ -0.43
SRSF4-206ENST00000605204 SLPIP03973 132 aa12.35□□□□□ -0.43
SRSF4-206ENST00000605204 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
SRSF4-206ENST00000605204 LINC00528Q8N1L1 170 aa12.35□□□□□ -0.43
SRSF4-206ENST00000605204 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
SRSF4-206ENST00000605204 IFITM10A6NMD0 228 aa12.34□□□□□ -0.43
SRSF4-206ENST00000605204 ZNF561-AS1K7EIQ3 104 aa12.34□□□□□ -0.43
SRSF4-206ENST00000605204 APOMO95445 188 aa12.34□□□□□ -0.43
SRSF4-206ENST00000605204 CIRBPQ14011 172 aaKnown RBP12.34□□□□□ -0.43
SRSF4-206ENST00000605204 SVBPQ8N300 66 aa12.33□□□□□ -0.44
SRSF4-206ENST00000605204 SNAPINO95295 136 aa12.32□□□□□ -0.44
SRSF4-206ENST00000605204 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
SRSF4-206ENST00000605204 Q6ZN92 141 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms