RNA–Protein interactions for RNA: ENST00000603492.1

FOCAD-204, Transcript of focadhesin, human

TSL 4

Gene FOCAD, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FOCAD-204	ENST00000603492	LGALS3	P17931	250 aa	Known RBP	4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	TMEM170B	Q5T4T1	132 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	CFAP126	Q5VTH2	177 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	UFSP1	Q6NVU6	142 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	C11orf72	Q8NBR9	251 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	RAB37	Q96AX2	223 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	PLEKHB2	Q96CS7	222 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	C1QTNF4	Q9BXJ3	329 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	TTTY13	Q9BZ97	58 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	VCX2	Q9H322	139 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	CBY1	Q9Y3M2	126 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	COL7A1	Q02388	2944 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	DNAH9	Q9NYC9	4486 aa		4.84	□□□□□ -1.63
FOCAD-204	ENST00000603492	AGRN	O00468	2067 aa		4.84	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGLV4-3	A0A075B6K6	122 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492		A0A1B0GWB2	263 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492		K7ERU9	68 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	LEPROT	O15243	131 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	RS1	O15537	224 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	COTL1	Q14019	142 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	MAPKAPK5-AS1	Q8N8E1	139 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	IL17D	Q8TAD2	202 aa		4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	TMEM263	Q8WUH6	116 aa	Known RBP	4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.83	□□□□□ -1.64
FOCAD-204	ENST00000603492	TRBV10-1	A0A0K0K1A3	114 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	GAGE12B	A1L429	117 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	TMEM238	C9JI98	176 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492		J3QQQ9	107 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	CIDEA	O60543	219 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	C12orf74	Q32Q52	190 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	C16orf74	Q96GX8	76 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	ZNF479	Q96JC4	524 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	TIMM21	Q9BVV7	248 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	MRPL16	Q9NX20	251 aa	Known RBP	4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	XCL2	Q9UBD3	114 aa		4.82	□□□□□ -1.64
FOCAD-204	ENST00000603492	NACA	E9PAV3	2078 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGHV3-73	A0A0B4J1V6	119 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	TRAV4	A0A0B4J268	109 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	TMEM223	A0PJW6	202 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492		K7ERJ3	54 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492		P0DMU3	169 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	FAM231A	P0DMU4	169 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	FAM231C	P0DMU5	169 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	ZNF22	P17026	224 aa	Predicted RBP	4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	AZU1	P20160	251 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	EMP1	P54849	157 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	MRPS36	P82909	103 aa	Known RBP	4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	RPL36A	P83881	106 aa	Known RBP	4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	RRN3P1	Q2M238	152 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	ZNRF2	Q8NHG8	242 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	RNASE8	Q8TDE3	154 aa	Known RBP	4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	RPL36AL	Q969Q0	106 aa	Known RBP	4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	AMELX	Q99217	191 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	WFDC10A	Q9H1F0	79 aa		4.81	□□□□□ -1.64
FOCAD-204	ENST00000603492	TRGV1	A0A0A0MS02	117 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492		A0A0J9YY99	117 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	TINCR	A0A1B0GVN0	87 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGLL5	B9A064	214 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492		K7EQD1	137 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGHV4-30-4	P0DP06	118 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	DAZ2	Q13117	558 aa	Known RBP	4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	OCIAD2	Q56VL3	154 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	DAZ4	Q86SG3	579 aa	Known RBP	4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	SBSPON	Q8IVN8	264 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	DAZ3	Q9NR90	486 aa	Known RBP	4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	C19orf73	Q9NVV2	129 aa		4.8	□□□□□ -1.64
FOCAD-204	ENST00000603492	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGHV3OR16-12	A0A075B7B8	117 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	UBE2D1	P51668	147 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	RPL24	P83731	157 aa	Known RBP	4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	DGAT2L7P	Q6IED9	249 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	C1orf158	Q8N1D5	194 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	SLC25A29	Q8N8R3	303 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	B9D2	Q9BPU9	175 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	NAA38	Q9BRA0	125 aa	Known RBP	4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	CHCHD7	Q9BUK0	85 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	GEMIN7	Q9H840	131 aa	Known RBP	4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	UBE2D4	Q9Y2X8	147 aa		4.79	□□□□□ -1.64
FOCAD-204	ENST00000603492	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492		A0A0J9YXV3	536 aa		4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492		A8MZ25	164 aa		4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492	TSPEAR-AS2	P59090	65 aa		4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492		Q6ZUT4	128 aa		4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492	DEFB104A	Q8WTQ1	72 aa		4.78	□□□□□ -1.64
FOCAD-204	ENST00000603492	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	IGHV1-58	A0A0C4DH39	117 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492		F8W1H4	67 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492		H7C423	109 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492		J3QR89	54 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	IGHV3-30	P01768	117 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	IGHV3-30-3	P0DP02	117 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	IGHV3-30-5	P0DP03	117 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	TIRAP	P58753	221 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	RBX1	P62877	108 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	HERVK_113	P63121	156 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492		Q6ZSN1	163 aa		4.77	□□□□□ -1.65
FOCAD-204	ENST00000603492	COPS9	Q8WXC6	57 aa		4.77	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 107 ms