RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DPM2O94777 84 aa12.46□□□□□ -0.41
VRK3-225ENST00000601912 ZNF25P17030 456 aaPredicted RBP12.46□□□□□ -0.41
VRK3-225ENST00000601912 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 HSBP1L1C9JCN9 74 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 IGKCP01834 107 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 PLNP26678 52 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 LELP1Q5T871 98 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 AMELXQ99217 191 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 C2orf88Q9BSF0 95 aa12.45□□□□□ -0.42
VRK3-225ENST00000601912 DNAH9Q9NYC9 4486 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 TIRAPP58753 221 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 Q6ZUT4 128 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 C15orf53Q8NAA6 179 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 PAM16Q9Y3D7 125 aa12.44□□□□□ -0.42
VRK3-225ENST00000601912 PKIAP61925 76 aa12.42□□□□□ -0.42
VRK3-225ENST00000601912 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
VRK3-225ENST00000601912 ZNF664Q8N3J9 261 aa12.42□□□□□ -0.42
VRK3-225ENST00000601912 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
VRK3-225ENST00000601912 hDV102S1A0JD36 115 aa12.41□□□□□ -0.42
VRK3-225ENST00000601912 MAJINQ3KP22 176 aa12.41□□□□□ -0.42
VRK3-225ENST00000601912 SPATA45Q537H7 98 aa12.41□□□□□ -0.42
VRK3-225ENST00000601912 MEGF8Q7Z7M0 2845 aa12.4□□□□□ -0.42
VRK3-225ENST00000601912 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
VRK3-225ENST00000601912 A0A1B0GUV1 79 aa12.4□□□□□ -0.42
VRK3-225ENST00000601912 COL7A1Q02388 2944 aa12.4□□□□□ -0.43
VRK3-225ENST00000601912 IGLV4-69A0A075B6H9 119 aa12.39□□□□□ -0.43
VRK3-225ENST00000601912 IGLL5B9A064 214 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 STAB2Q8WWQ8 2551 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 RBX1P62877 108 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 STPG4Q8N801 248 aa12.38□□□□□ -0.43
VRK3-225ENST00000601912 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
VRK3-225ENST00000601912 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
VRK3-225ENST00000601912 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
VRK3-225ENST00000601912 NFE4Q86UQ8 179 aa12.37□□□□□ -0.43
VRK3-225ENST00000601912 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
VRK3-225ENST00000601912 UBE2D1P51668 147 aa12.36□□□□□ -0.43
VRK3-225ENST00000601912 ESRGQ1W209 222 aa12.36□□□□□ -0.43
VRK3-225ENST00000601912 CHAC1Q9BUX1 264 aa12.36□□□□□ -0.43
VRK3-225ENST00000601912 PRO1933Q9H354 126 aa12.35□□□□□ -0.43
VRK3-225ENST00000601912 TRAV13-1A0A0B4J241 112 aa12.35□□□□□ -0.43
VRK3-225ENST00000601912 TINCRA0A1B0GVN0 87 aa12.35□□□□□ -0.43
VRK3-225ENST00000601912 SEC11AP67812 179 aa12.35□□□□□ -0.43
VRK3-225ENST00000601912 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
VRK3-225ENST00000601912 GEMIN7Q9H840 131 aaKnown RBP12.34□□□□□ -0.43
VRK3-225ENST00000601912 PRKDCP78527 4128 aaKnown RBP12.34□□□□□ -0.43
VRK3-225ENST00000601912 HERVK_113P61574 105 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 ANKRD39Q53RE8 183 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
VRK3-225ENST00000601912 CCL18P55774 89 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 HERVK_113P63121 156 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 FAM19A3Q7Z5A8 133 aa12.32□□□□□ -0.44
VRK3-225ENST00000601912 NUPR2A6NF83 97 aa12.31□□□□□ -0.44
VRK3-225ENST00000601912 TCTAP57738 103 aa12.31□□□□□ -0.44
VRK3-225ENST00000601912 PCP4L1A6NKN8 68 aa12.3□□□□□ -0.44
VRK3-225ENST00000601912 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
VRK3-225ENST00000601912 LINC00242Q5T6M2 205 aa12.3□□□□□ -0.44
VRK3-225ENST00000601912 WFDC10BQ8IUB3 73 aa12.3□□□□□ -0.44
VRK3-225ENST00000601912 NMUP48645 174 aa12.29□□□□□ -0.44
VRK3-225ENST00000601912 LINC00269Q8N2A0 174 aa12.29□□□□□ -0.44
VRK3-225ENST00000601912 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
VRK3-225ENST00000601912 C14orf144Q96I85 54 aa12.29□□□□□ -0.44
VRK3-225ENST00000601912 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
VRK3-225ENST00000601912 Q8N3U1 123 aa12.29□□□□□ -0.44
VRK3-225ENST00000601912 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 E9PLD3 99 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 H3BRM9 83 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 CCL25O15444 150 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 SS18Q15532 418 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
VRK3-225ENST00000601912 TMEM223A0PJW6 202 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 IGHV3-33P01772 117 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 IGHV3-30-3P0DP02 117 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 REG3AQ06141 175 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 MIEN1Q9BRT3 115 aa12.27□□□□□ -0.45
VRK3-225ENST00000601912 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.45
VRK3-225ENST00000601912 IGLV5-45A0A087WSX0 123 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 COX8AP10176 69 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 COX6A2Q02221 97 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 CLPSL2Q6UWE3 100 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 IGKV2D-26A0A0A0MRZ7 120 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 CDKN2A-AS1Q9UH64 79 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 KLK12Q9UKR0 248 aa12.26□□□□□ -0.45
VRK3-225ENST00000601912 LINC01556Q5JQF7 62 aa12.25□□□□□ -0.45
VRK3-225ENST00000601912 APLNQ9ULZ1 77 aa12.25□□□□□ -0.45
VRK3-225ENST00000601912 CRPP02741 224 aa12.23□□□□□ -0.45
VRK3-225ENST00000601912 DDTP30046 118 aa12.23□□□□□ -0.45
VRK3-225ENST00000601912 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
VRK3-225ENST00000601912 PCP2Q8IVA1 136 aa12.22□□□□□ -0.45
VRK3-225ENST00000601912 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms