RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PHOX2AO14813 284 aa13.71□□□□□ -0.21
PNKP-209ENST00000596726 CLRN3Q8NCR9 226 aa13.71□□□□□ -0.21
PNKP-209ENST00000596726 TMEM101Q96IK0 257 aa13.71□□□□□ -0.21
PNKP-209ENST00000596726 NPYP01303 97 aa13.7□□□□□ -0.22
PNKP-209ENST00000596726 HAMPP81172 84 aa13.7□□□□□ -0.22
PNKP-209ENST00000596726 COMMD7Q86VX2 200 aa13.7□□□□□ -0.22
PNKP-209ENST00000596726 SEC11CQ9BY50 192 aa13.7□□□□□ -0.22
PNKP-209ENST00000596726 CDC42SE2Q9NRR3 84 aa13.7□□□□□ -0.22
PNKP-209ENST00000596726 DGAT2L7PQ6IED9 249 aa13.69□□□□□ -0.22
PNKP-209ENST00000596726 CHCHD10Q8WYQ3 142 aaPredicted RBP13.69□□□□□ -0.22
PNKP-209ENST00000596726 IMMP2LQ96T52 175 aa13.69□□□□□ -0.22
PNKP-209ENST00000596726 SMIM2Q9BVW6 85 aa13.69□□□□□ -0.22
PNKP-209ENST00000596726 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
PNKP-209ENST00000596726 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
PNKP-209ENST00000596726 CSDC2Q9Y534 153 aaKnown RBP13.68□□□□□ -0.22
PNKP-209ENST00000596726 TCAPO15273 167 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 S100A1P23297 94 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 TMEM136Q6ZRR5 245 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 ZNF664Q8N3J9 261 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 CTDSP1Q9GZU7 261 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
PNKP-209ENST00000596726 LINC00959A0A1B0GUT2 108 aa13.66□□□□□ -0.22
PNKP-209ENST00000596726 ATP6V1G1O75348 118 aa13.66□□□□□ -0.22
PNKP-209ENST00000596726 C9orf163Q8N9P6 203 aa13.66□□□□□ -0.22
PNKP-209ENST00000596726 PRELID3AQ96N28 172 aa13.66□□□□□ -0.22
PNKP-209ENST00000596726 EPM2AB3EWF7 344 aa13.65□□□□□ -0.22
PNKP-209ENST00000596726 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
PNKP-209ENST00000596726 TIMM21Q9BVV7 248 aa13.65□□□□□ -0.22
PNKP-209ENST00000596726 VPS13BQ7Z7G8 4022 aa13.65□□□□□ -0.22
PNKP-209ENST00000596726 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
PNKP-209ENST00000596726 SMR3BP02814 79 aaPredicted RBP13.64□□□□□ -0.23
PNKP-209ENST00000596726 CNBPP62633 177 aaKnown RBP13.64□□□□□ -0.23
PNKP-209ENST00000596726 FOXI1Q12951 378 aa13.64□□□□□ -0.23
PNKP-209ENST00000596726 C10orf91Q5T1B1 145 aa13.64□□□□□ -0.23
PNKP-209ENST00000596726 C15orf56Q8N910 161 aa13.64□□□□□ -0.23
PNKP-209ENST00000596726 hDV102S1A0JD36 115 aa13.63□□□□□ -0.23
PNKP-209ENST00000596726 TMEM18Q96B42 140 aa13.63□□□□□ -0.23
PNKP-209ENST00000596726 LAMTOR2Q9Y2Q5 125 aa13.63□□□□□ -0.23
PNKP-209ENST00000596726 SLPIP03973 132 aa13.62□□□□□ -0.23
PNKP-209ENST00000596726 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
PNKP-209ENST00000596726 SLC7A5P1Q8MH63 180 aa13.62□□□□□ -0.23
PNKP-209ENST00000596726 CCL25O15444 150 aa13.61□□□□□ -0.23
PNKP-209ENST00000596726 SS18Q15532 418 aa13.61□□□□□ -0.23
PNKP-209ENST00000596726 Q5VSD8 79 aa13.61□□□□□ -0.23
PNKP-209ENST00000596726 TRAV9-1A0A075B6T8 112 aa13.6□□□□□ -0.23
PNKP-209ENST00000596726 XCL1P47992 114 aa13.6□□□□□ -0.23
PNKP-209ENST00000596726 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
PNKP-209ENST00000596726 SCXQ7RTU7 201 aa13.6□□□□□ -0.23
PNKP-209ENST00000596726 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
PNKP-209ENST00000596726 CARHSP1Q9Y2V2 147 aaKnown RBP13.6□□□□□ -0.23
PNKP-209ENST00000596726 FAM104AQ969W3 186 aa13.59□□□□□ -0.23
PNKP-209ENST00000596726 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
PNKP-209ENST00000596726 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
PNKP-209ENST00000596726 SDIM1Q6ZPB5 146 aa13.58□□□□□ -0.24
PNKP-209ENST00000596726 Q6ZUT4 128 aa13.58□□□□□ -0.24
PNKP-209ENST00000596726 RNASE13Q5GAN3 156 aaKnown RBP13.57□□□□□ -0.24
PNKP-209ENST00000596726 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
PNKP-209ENST00000596726 GVQW2A0A096LPI5 108 aaPredicted RBP13.56□□□□□ -0.24
PNKP-209ENST00000596726 C1orf196B1AJZ1 125 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 FAM229AH3BQW9 127 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 RAB5AP20339 215 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 HIGD2BQ4VC39 106 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 CIRBP-AS1Q8TBR5 109 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 SPANXA1Q9NS26 97 aa13.56□□□□□ -0.24
PNKP-209ENST00000596726 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.55□□□□□ -0.24
PNKP-209ENST00000596726 LOC389332A0A1B0GUA5 103 aa13.55□□□□□ -0.24
PNKP-209ENST00000596726 MRPS36P82909 103 aaKnown RBP13.55□□□□□ -0.24
PNKP-209ENST00000596726 Q8N8P6 123 aa13.55□□□□□ -0.24
PNKP-209ENST00000596726 SRRM2Q9UQ35 2752 aaKnown RBP13.54□□□□□ -0.24
PNKP-209ENST00000596726 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
PNKP-209ENST00000596726 S100PP25815 95 aa13.53□□□□□ -0.24
PNKP-209ENST00000596726 RHEBQ15382 184 aa13.53□□□□□ -0.24
PNKP-209ENST00000596726 IGHV3-64A0A075B6Q5 118 aa13.52□□□□□ -0.25
PNKP-209ENST00000596726 TRAV13-1A0A0B4J241 112 aa13.52□□□□□ -0.25
PNKP-209ENST00000596726 OPRPNQ99935 248 aaPredicted RBP13.52□□□□□ -0.25
PNKP-209ENST00000596726 PYGO1Q9Y3Y4 419 aa13.52□□□□□ -0.25
PNKP-209ENST00000596726 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.52□□□□□ -0.25
PNKP-209ENST00000596726 PANO1I0J062 215 aa13.51□□□□□ -0.25
PNKP-209ENST00000596726 LINC00528Q8N1L1 170 aa13.51□□□□□ -0.25
PNKP-209ENST00000596726 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
PNKP-209ENST00000596726 RPS10P5Q9NQ39 176 aa13.51□□□□□ -0.25
PNKP-209ENST00000596726 CIRBPQ14011 172 aaKnown RBP13.5□□□□□ -0.25
PNKP-209ENST00000596726 KIAA1644Q3SXP7 199 aa13.5□□□□□ -0.25
PNKP-209ENST00000596726 K7EMI3 77 aa13.49□□□□□ -0.25
PNKP-209ENST00000596726 IFI27P40305 119 aaPredicted RBP13.49□□□□□ -0.25
PNKP-209ENST00000596726 NXT2Q9NPJ8 142 aaKnown RBP13.49□□□□□ -0.25
PNKP-209ENST00000596726 COX7A2LO14548 114 aa13.48□□□□□ -0.25
PNKP-209ENST00000596726 INAFM2P0DMQ5 153 aa13.48□□□□□ -0.25
PNKP-209ENST00000596726 COX19Q49B96 90 aa13.48□□□□□ -0.25
PNKP-209ENST00000596726 IGLV4-3A0A075B6K6 122 aa13.47□□□□□ -0.25
PNKP-209ENST00000596726 ORMDL2Q53FV1 153 aa13.47□□□□□ -0.25
PNKP-209ENST00000596726 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
PNKP-209ENST00000596726 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.25
PNKP-209ENST00000596726 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
PNKP-209ENST00000596726 IFITM10A6NMD0 228 aa13.45□□□□□ -0.26
PNKP-209ENST00000596726 PLA2G1BP04054 148 aaKnown RBP13.45□□□□□ -0.26
PNKP-209ENST00000596726 MALP21145 153 aa13.45□□□□□ -0.26
PNKP-209ENST00000596726 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
PNKP-209ENST00000596726 IGHV3OR16-9A0A0B4J2B5 98 aa13.44□□□□□ -0.26
PNKP-209ENST00000596726 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms