RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ZANQ9Y493 2812 aa12.56□□□□□ -0.4
ARHGEF1-213ENST00000595897 HERVK_113P63121 156 aa12.56□□□□□ -0.4
ARHGEF1-213ENST00000595897 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-213ENST00000595897 KHDC1LQ5JSQ8 128 aa12.56□□□□□ -0.4
ARHGEF1-213ENST00000595897 USP9XQ93008 2570 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 TRAV13-1A0A0B4J241 112 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 LINC01356Q8N9X3 169 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 IGLV5-45A0A087WSX0 123 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 C11orf72Q8NBR9 251 aa12.55□□□□□ -0.4
ARHGEF1-213ENST00000595897 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
ARHGEF1-213ENST00000595897 PRIMA1Q86XR5 153 aa12.54□□□□□ -0.4
ARHGEF1-213ENST00000595897 DYNLRB2Q8TF09 96 aa12.54□□□□□ -0.4
ARHGEF1-213ENST00000595897 INSP01308 110 aa12.54□□□□□ -0.4
ARHGEF1-213ENST00000595897 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
ARHGEF1-213ENST00000595897 NDUFA7O95182 113 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 DEFB121Q5J5C9 76 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 POLQO75417 2590 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 CSMD2Q7Z408 3487 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 COX7A2LO14548 114 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 MAP6D1Q9H9H5 199 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 FLNCQ14315 2725 aa12.53□□□□□ -0.4
ARHGEF1-213ENST00000595897 COPS9Q8WXC6 57 aa12.52□□□□□ -0.4
ARHGEF1-213ENST00000595897 XCL2Q9UBD3 114 aa12.52□□□□□ -0.4
ARHGEF1-213ENST00000595897 A8MTW9 85 aa12.52□□□□□ -0.41
ARHGEF1-213ENST00000595897 PEMTQ9UBM1 199 aa12.52□□□□□ -0.41
ARHGEF1-213ENST00000595897 DOPEY1Q5JWR5 2465 aa12.52□□□□□ -0.41
ARHGEF1-213ENST00000595897 IGLV5-39A0A0G2JS06 123 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 RS1O15537 224 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 Q8N2B8 174 aa12.51□□□□□ -0.41
ARHGEF1-213ENST00000595897 DSCR9P59020 149 aa12.5□□□□□ -0.41
ARHGEF1-213ENST00000595897 SMIM1B2RUZ4 78 aa12.5□□□□□ -0.41
ARHGEF1-213ENST00000595897 ACACBO00763 2458 aa12.49□□□□□ -0.41
ARHGEF1-213ENST00000595897 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
ARHGEF1-213ENST00000595897 PRORYQ9H606 182 aa12.49□□□□□ -0.41
ARHGEF1-213ENST00000595897 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 CFAP46Q8IYW2 2715 aa12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 CENPEQ02224 2701 aa12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 ACYP1P07311 99 aa12.48□□□□□ -0.41
ARHGEF1-213ENST00000595897 MXRA5Q9NR99 2828 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 MYO18BQ8IUG5 2567 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 TRBV7-7A0A0K0K1E9 115 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 J3QLI3 93 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 Q6YL49 198 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 CUBNO60494 3623 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 HIST2H2BDQ6DRA6 164 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
ARHGEF1-213ENST00000595897 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.42
ARHGEF1-213ENST00000595897 BAALC-AS2P0C853 105 aa12.46□□□□□ -0.42
ARHGEF1-213ENST00000595897 UTP20O75691 2785 aaKnown RBP12.45□□□□□ -0.42
ARHGEF1-213ENST00000595897 FAM236AA0A1B0GUQ0 79 aa12.45□□□□□ -0.42
ARHGEF1-213ENST00000595897 FAM236BA0A1B0GV22 79 aa12.45□□□□□ -0.42
ARHGEF1-213ENST00000595897 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
ARHGEF1-213ENST00000595897 DEFB114Q30KQ6 69 aa12.44□□□□□ -0.42
ARHGEF1-213ENST00000595897 STHQ8IWL8 128 aa12.44□□□□□ -0.42
ARHGEF1-213ENST00000595897 SMIM20Q8N5G0 67 aa12.44□□□□□ -0.42
ARHGEF1-213ENST00000595897 FAM208BQ5VWN6 2430 aa12.44□□□□□ -0.42
ARHGEF1-213ENST00000595897 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 K7EQD1 137 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 TRACP01848 142 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 NTM-AS1Q6ZSK4 140 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 UBE2L6O14933 153 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 HERV-K104P63124 156 aa12.43□□□□□ -0.42
ARHGEF1-213ENST00000595897 CSDC2Q9Y534 153 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-213ENST00000595897 Q6ZTI0 123 aa12.42□□□□□ -0.42
ARHGEF1-213ENST00000595897 C3orf56Q8N813 242 aa12.42□□□□□ -0.42
ARHGEF1-213ENST00000595897 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
ARHGEF1-213ENST00000595897 C4orf3Q8WVX3 66 aa12.41□□□□□ -0.42
ARHGEF1-213ENST00000595897 FAM218AQ96MZ4 157 aa12.41□□□□□ -0.42
ARHGEF1-213ENST00000595897 TRBV10-1A0A0K0K1A3 114 aa12.41□□□□□ -0.42
ARHGEF1-213ENST00000595897 SMCR5Q8TEV8 140 aa12.41□□□□□ -0.42
ARHGEF1-213ENST00000595897 F5H768 121 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 LINC00643Q86TS7 51 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 IMUPQ9GZP8 106 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 Q9HAA7 133 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
ARHGEF1-213ENST00000595897 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 CRPP02741 224 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 TLN2Q9Y4G6 2542 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 GAGE2AQ6NT46 116 aa12.39□□□□□ -0.43
ARHGEF1-213ENST00000595897 A0A096LNT2 108 aa12.38□□□□□ -0.43
ARHGEF1-213ENST00000595897 TRAV13-2A0A0B4J235 113 aa12.38□□□□□ -0.43
ARHGEF1-213ENST00000595897 Q96MF0 132 aa12.38□□□□□ -0.43
ARHGEF1-213ENST00000595897 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
ARHGEF1-213ENST00000595897 CHD6Q8TD26 2715 aa12.37□□□□□ -0.43
ARHGEF1-213ENST00000595897 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms