RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 H0Y8G0 127 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 FGF6P10767 208 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 PAPPA-AS1Q5QFB9 102 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 PET117Q6UWS5 81 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 UBE2D4Q9Y2X8 147 aa9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
SHKBP1-209ENST00000595803 TRAV8-6A0A0B4J262 113 aa9□□□□□ -0.97
SHKBP1-209ENST00000595803 VCX2Q9H322 139 aa9□□□□□ -0.97
SHKBP1-209ENST00000595803 C20orf202A1L168 122 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 NPSP0C0P6 89 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 PKIAP61925 76 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 JOSD1Q15040 202 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 ESRGQ1W209 222 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 MRPL52Q86TS9 123 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-209ENST00000595803 ZNF25P17030 456 aaPredicted RBP8.98□□□□□ -0.97
SHKBP1-209ENST00000595803 PMVKQ15126 192 aa8.98□□□□□ -0.97
SHKBP1-209ENST00000595803 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
SHKBP1-209ENST00000595803 BAALCQ8WXS3 180 aa8.98□□□□□ -0.97
SHKBP1-209ENST00000595803 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
SHKBP1-209ENST00000595803 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
SHKBP1-209ENST00000595803 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
SHKBP1-209ENST00000595803 CCL18P55774 89 aa8.97□□□□□ -0.97
SHKBP1-209ENST00000595803 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
SHKBP1-209ENST00000595803 A0A087WX48 190 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 ZNF664Q8N3J9 261 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 CST9LQ9H4G1 147 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 CDC42SE2Q9NRR3 84 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.98
SHKBP1-209ENST00000595803 A0A1B0GUV1 79 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 TCTAP57738 103 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 RBX1P62877 108 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 PYY3Q5JQD4 70 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 AMELXQ99217 191 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 C2orf88Q9BSF0 95 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 APLNQ9ULZ1 77 aa8.95□□□□□ -0.98
SHKBP1-209ENST00000595803 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
SHKBP1-209ENST00000595803 Q6ZUT4 128 aa8.94□□□□□ -0.98
SHKBP1-209ENST00000595803 Q8N976 141 aa8.94□□□□□ -0.98
SHKBP1-209ENST00000595803 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
SHKBP1-209ENST00000595803 KMT2AQ03164 3969 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 ODF1Q14990 250 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 FAM104AQ969W3 186 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
SHKBP1-209ENST00000595803 F8VRH5 84 aa8.92□□□□□ -0.98
SHKBP1-209ENST00000595803 DPM2O94777 84 aa8.92□□□□□ -0.98
SHKBP1-209ENST00000595803 LY6G6CO95867 125 aa8.92□□□□□ -0.98
SHKBP1-209ENST00000595803 MRPL35Q9NZE8 188 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-209ENST00000595803 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
SHKBP1-209ENST00000595803 IGHV3-30P01768 117 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 IGHV3-33P01772 117 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 IGKCP01834 107 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 SMIM6P0DI80 62 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 IGHV3-30-5P0DP03 117 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
SHKBP1-209ENST00000595803 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
SHKBP1-209ENST00000595803 PLNP26678 52 aa8.9□□□□□ -0.98
SHKBP1-209ENST00000595803 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
SHKBP1-209ENST00000595803 TRAV13-1A0A0B4J241 112 aa8.89□□□□□ -0.99
SHKBP1-209ENST00000595803 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
SHKBP1-209ENST00000595803 SEC11AP67812 179 aa8.89□□□□□ -0.99
SHKBP1-209ENST00000595803 S100A12P80511 92 aa8.89□□□□□ -0.99
SHKBP1-209ENST00000595803 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
SHKBP1-209ENST00000595803 HSBP1L1C9JCN9 74 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 SIVA1O15304 175 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 UBE2D1P51668 147 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 SS18Q15532 418 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 LINC00518Q8N0U6 118 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 Q8N3U1 123 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 C12orf57Q99622 126 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 GEMIN7Q9H840 131 aaKnown RBP8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
SHKBP1-209ENST00000595803 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 TRAV9-2A0A087WT02 112 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 TINCRA0A1B0GVN0 87 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 IGLC3P0DOY3 106 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 NFE4Q86UQ8 179 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 Q9H8V8 135 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 DNAH10Q8IVF4 4471 aa8.87□□□□□ -0.99
SHKBP1-209ENST00000595803 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms