RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
LIG1-208ENST00000595758 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 ZNF664Q8N3J9 261 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 ALKBH7Q9BT30 221 aaPredicted RBP9.51□□□□□ -0.89
LIG1-208ENST00000595758 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
LIG1-208ENST00000595758 CDC42SE2Q9NRR3 84 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 CSDC2Q9Y534 153 aaKnown RBP9.51□□□□□ -0.89
LIG1-208ENST00000595758 TRAPPC1Q9Y5R8 145 aa9.51□□□□□ -0.89
LIG1-208ENST00000595758 LECT2O14960 151 aa9.5□□□□□ -0.89
LIG1-208ENST00000595758 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
LIG1-208ENST00000595758 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
LIG1-208ENST00000595758 WFDC2Q14508 124 aa9.5□□□□□ -0.89
LIG1-208ENST00000595758 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
LIG1-208ENST00000595758 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
LIG1-208ENST00000595758 K7EMI3 77 aa9.49□□□□□ -0.89
LIG1-208ENST00000595758 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
LIG1-208ENST00000595758 Q8N814 137 aa9.49□□□□□ -0.89
LIG1-208ENST00000595758 C16orf90A8MZG2 172 aa9.48□□□□□ -0.89
LIG1-208ENST00000595758 ORMDL2Q53FV1 153 aa9.48□□□□□ -0.89
LIG1-208ENST00000595758 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
LIG1-208ENST00000595758 SPANXA1Q9NS26 97 aa9.48□□□□□ -0.89
LIG1-208ENST00000595758 FUSP35637 526 aaKnown RBP eCLIP9.47□□□□□ -0.89
LIG1-208ENST00000595758 PKHD1P08F94 4074 aa9.46□□□□□ -0.89
LIG1-208ENST00000595758 LINC00959A0A1B0GUT2 108 aa9.46□□□□□ -0.9
LIG1-208ENST00000595758 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
LIG1-208ENST00000595758 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
LIG1-208ENST00000595758 Q6ZUT4 128 aa9.46□□□□□ -0.9
LIG1-208ENST00000595758 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
LIG1-208ENST00000595758 CHCHD10Q8WYQ3 142 aaPredicted RBP9.46□□□□□ -0.9
LIG1-208ENST00000595758 CYSLTR1Q9Y271 337 aa9.46□□□□□ -0.9
LIG1-208ENST00000595758 DYNC1H1Q14204 4646 aaKnown RBP9.45□□□□□ -0.9
LIG1-208ENST00000595758 USP17L23D6RBM5 183 aa9.45□□□□□ -0.9
LIG1-208ENST00000595758 SS18Q15532 418 aa9.45□□□□□ -0.9
LIG1-208ENST00000595758 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
LIG1-208ENST00000595758 RNASE13Q5GAN3 156 aaKnown RBP9.45□□□□□ -0.9
LIG1-208ENST00000595758 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
LIG1-208ENST00000595758 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
LIG1-208ENST00000595758 G0S2P27469 103 aa9.44□□□□□ -0.9
LIG1-208ENST00000595758 XCL1P47992 114 aa9.44□□□□□ -0.9
LIG1-208ENST00000595758 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
LIG1-208ENST00000595758 FA2HQ7L5A8 372 aa9.44□□□□□ -0.9
LIG1-208ENST00000595758 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
LIG1-208ENST00000595758 IGLV5-52A0A0A0MRZ9 124 aa9.43□□□□□ -0.9
LIG1-208ENST00000595758 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
LIG1-208ENST00000595758 C1orf196B1AJZ1 125 aa9.43□□□□□ -0.9
LIG1-208ENST00000595758 CCL25O15444 150 aa9.43□□□□□ -0.9
LIG1-208ENST00000595758 FAM104AQ969W3 186 aa9.43□□□□□ -0.9
LIG1-208ENST00000595758 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
LIG1-208ENST00000595758 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
LIG1-208ENST00000595758 C18orf32Q8TCD1 76 aa9.42□□□□□ -0.9
LIG1-208ENST00000595758 IGLV4-3A0A075B6K6 122 aa9.41□□□□□ -0.9
LIG1-208ENST00000595758 FOXI1Q12951 378 aa9.41□□□□□ -0.9
LIG1-208ENST00000595758 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
LIG1-208ENST00000595758 IGIPA6NJ69 53 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 COLCA2A8K830 154 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 PRSS1P07477 247 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 GCSHP23434 173 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 TMEM141Q96I45 108 aa9.4□□□□□ -0.9
LIG1-208ENST00000595758 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.91
LIG1-208ENST00000595758 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
LIG1-208ENST00000595758 SCO1O75880 301 aa9.39□□□□□ -0.91
LIG1-208ENST00000595758 NPSP0C0P6 89 aa9.39□□□□□ -0.91
LIG1-208ENST00000595758 LINC00614P0C842 121 aa9.39□□□□□ -0.91
LIG1-208ENST00000595758 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
LIG1-208ENST00000595758 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 LINC01549A6NIU2 74 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 TRGC2P03986 189 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 RAB5BP61020 215 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 Q6ZN92 141 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 SCGB3A1Q96QR1 104 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 VCX2Q9H322 139 aa9.38□□□□□ -0.91
LIG1-208ENST00000595758 KIAA1109Q2LD37 5005 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 ERASQ7Z444 233 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 URB1-AS1Q96HZ7 61 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 LRP1BQ9NZR2 4599 aa9.37□□□□□ -0.91
LIG1-208ENST00000595758 COX7A2LO14548 114 aa9.36□□□□□ -0.91
LIG1-208ENST00000595758 AMELXQ99217 191 aa9.36□□□□□ -0.91
LIG1-208ENST00000595758 IGHV1-58A0A0C4DH39 117 aa9.35□□□□□ -0.91
LIG1-208ENST00000595758 MALP21145 153 aa9.35□□□□□ -0.91
LIG1-208ENST00000595758 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
LIG1-208ENST00000595758 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
LIG1-208ENST00000595758 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
LIG1-208ENST00000595758 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
LIG1-208ENST00000595758 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
LIG1-208ENST00000595758 CDK2AP2O75956 126 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 HBDP02042 147 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 UBE2D1P51668 147 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms