RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 RAB5AP20339 215 aa13.61□□□□□ -0.23
ERCC2-212ENST00000591309 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
ERCC2-212ENST00000591309 CLRN3Q8NCR9 226 aa13.61□□□□□ -0.23
ERCC2-212ENST00000591309 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
ERCC2-212ENST00000591309 APOC3P02656 99 aa13.58□□□□□ -0.24
ERCC2-212ENST00000591309 KRTAP10-1P60331 282 aa13.58□□□□□ -0.24
ERCC2-212ENST00000591309 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
ERCC2-212ENST00000591309 LOC389332A0A1B0GUA5 103 aa13.57□□□□□ -0.24
ERCC2-212ENST00000591309 GAGE12HA6NDE8 117 aa13.57□□□□□ -0.24
ERCC2-212ENST00000591309 SS18Q15532 418 aa13.57□□□□□ -0.24
ERCC2-212ENST00000591309 KRTAP26-1Q6PEX3 210 aa13.57□□□□□ -0.24
ERCC2-212ENST00000591309 CHCHD10Q8WYQ3 142 aaPredicted RBP13.57□□□□□ -0.24
ERCC2-212ENST00000591309 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
ERCC2-212ENST00000591309 SNAPINO95295 136 aa13.56□□□□□ -0.24
ERCC2-212ENST00000591309 COX19Q49B96 90 aa13.56□□□□□ -0.24
ERCC2-212ENST00000591309 CSDC2Q9Y534 153 aaKnown RBP13.56□□□□□ -0.24
ERCC2-212ENST00000591309 CFAP161Q6P656 301 aa13.55□□□□□ -0.24
ERCC2-212ENST00000591309 SVBPQ8N300 66 aa13.55□□□□□ -0.24
ERCC2-212ENST00000591309 UBE2D4Q9Y2X8 147 aa13.55□□□□□ -0.24
ERCC2-212ENST00000591309 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
ERCC2-212ENST00000591309 AP5S1Q9NUS5 200 aa13.54□□□□□ -0.24
ERCC2-212ENST00000591309 LINC00959A0A1B0GUT2 108 aa13.53□□□□□ -0.24
ERCC2-212ENST00000591309 PRSS47A8MTI9 375 aa13.53□□□□□ -0.24
ERCC2-212ENST00000591309 hDV102S1A0JD36 115 aa13.52□□□□□ -0.25
ERCC2-212ENST00000591309 PRSS1P07477 247 aa13.52□□□□□ -0.25
ERCC2-212ENST00000591309 XCL1P47992 114 aa13.52□□□□□ -0.25
ERCC2-212ENST00000591309 Q8N8P6 123 aa13.52□□□□□ -0.25
ERCC2-212ENST00000591309 GNB1LQ9BYB4 327 aa13.52□□□□□ -0.25
ERCC2-212ENST00000591309 CCL25O15444 150 aa13.51□□□□□ -0.25
ERCC2-212ENST00000591309 RPL39P62891 51 aaKnown RBP13.51□□□□□ -0.25
ERCC2-212ENST00000591309 KIAA1644Q3SXP7 199 aa13.51□□□□□ -0.25
ERCC2-212ENST00000591309 SPANXA1Q9NS26 97 aa13.51□□□□□ -0.25
ERCC2-212ENST00000591309 KIAA1109Q2LD37 5005 aa13.51□□□□□ -0.25
ERCC2-212ENST00000591309 MT-ND6P03923 174 aa13.5□□□□□ -0.25
ERCC2-212ENST00000591309 IFI27P40305 119 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-212ENST00000591309 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
ERCC2-212ENST00000591309 C1orf196B1AJZ1 125 aa13.49□□□□□ -0.25
ERCC2-212ENST00000591309 ORMDL2Q53FV1 153 aa13.49□□□□□ -0.25
ERCC2-212ENST00000591309 RNASE13Q5GAN3 156 aaKnown RBP13.49□□□□□ -0.25
ERCC2-212ENST00000591309 LRP1BQ9NZR2 4599 aa13.49□□□□□ -0.25
ERCC2-212ENST00000591309 TRAV13-1A0A0B4J241 112 aa13.48□□□□□ -0.25
ERCC2-212ENST00000591309 K7EMI3 77 aa13.48□□□□□ -0.25
ERCC2-212ENST00000591309 LINC01620Q4KN68 170 aa13.48□□□□□ -0.25
ERCC2-212ENST00000591309 Q6ZUT4 128 aa13.48□□□□□ -0.25
ERCC2-212ENST00000591309 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.47□□□□□ -0.25
ERCC2-212ENST00000591309 FABP9Q0Z7S8 132 aa13.47□□□□□ -0.25
ERCC2-212ENST00000591309 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
ERCC2-212ENST00000591309 G0S2P27469 103 aa13.46□□□□□ -0.25
ERCC2-212ENST00000591309 XGP55808 180 aa13.46□□□□□ -0.25
ERCC2-212ENST00000591309 FOXI1Q12951 378 aa13.46□□□□□ -0.25
ERCC2-212ENST00000591309 PRSS3P2Q8NHM4 247 aa13.46□□□□□ -0.25
ERCC2-212ENST00000591309 MRPL18Q9H0U6 180 aaKnown RBP13.46□□□□□ -0.25
ERCC2-212ENST00000591309 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
ERCC2-212ENST00000591309 DNAH5Q8TE73 4624 aa13.45□□□□□ -0.26
ERCC2-212ENST00000591309 MRPS36P82909 103 aaKnown RBP13.45□□□□□ -0.26
ERCC2-212ENST00000591309 MALP21145 153 aa13.44□□□□□ -0.26
ERCC2-212ENST00000591309 HIGD2BQ4VC39 106 aa13.44□□□□□ -0.26
ERCC2-212ENST00000591309 HERC2O95714 4834 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 IGHV1-58A0A0C4DH39 117 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 C2orf66Q6UXQ4 117 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 Q8N1X5 172 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 C15orf56Q8N910 161 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 C9orf163Q8N9P6 203 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 FAM30AQ9NZY2 134 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
ERCC2-212ENST00000591309 TGIF2-C20orf24A0A0A6YYL0 155 aa13.42□□□□□ -0.26
ERCC2-212ENST00000591309 IFITM10A6NMD0 228 aa13.42□□□□□ -0.26
ERCC2-212ENST00000591309 CNBPP62633 177 aaKnown RBP13.42□□□□□ -0.26
ERCC2-212ENST00000591309 OPRPNQ99935 248 aaPredicted RBP13.42□□□□□ -0.26
ERCC2-212ENST00000591309 TRAPPC1Q9Y5R8 145 aa13.42□□□□□ -0.26
ERCC2-212ENST00000591309 COX7A2LO14548 114 aa13.41□□□□□ -0.26
ERCC2-212ENST00000591309 Q6ZN92 141 aa13.41□□□□□ -0.26
ERCC2-212ENST00000591309 ALKBH7Q9BT30 221 aaPredicted RBP13.41□□□□□ -0.26
ERCC2-212ENST00000591309 HAMPP81172 84 aa13.4□□□□□ -0.26
ERCC2-212ENST00000591309 TMEM141Q96I45 108 aa13.4□□□□□ -0.26
ERCC2-212ENST00000591309 GVQW2A0A096LPI5 108 aaPredicted RBP13.39□□□□□ -0.27
ERCC2-212ENST00000591309 ZNF561-AS1K7EIQ3 104 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 APOMO95445 188 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 TEX43Q6ZNM6 134 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 C2orf88Q9BSF0 95 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 SMCO4Q9NRQ5 59 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 RYR1P21817 5038 aa13.39□□□□□ -0.27
ERCC2-212ENST00000591309 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
ERCC2-212ENST00000591309 IGHV3-64A0A075B6Q5 118 aa13.38□□□□□ -0.27
ERCC2-212ENST00000591309 Q6ZSA8 131 aa13.38□□□□□ -0.27
ERCC2-212ENST00000591309 FA2HQ7L5A8 372 aa13.38□□□□□ -0.27
ERCC2-212ENST00000591309 SLC7A5P1Q8MH63 180 aa13.38□□□□□ -0.27
ERCC2-212ENST00000591309 EPM2AB3EWF7 344 aa13.37□□□□□ -0.27
ERCC2-212ENST00000591309 SMR3BP02814 79 aaPredicted RBP13.37□□□□□ -0.27
ERCC2-212ENST00000591309 PAPPA-AS1Q5QFB9 102 aa13.37□□□□□ -0.27
ERCC2-212ENST00000591309 C5orf38Q86SI9 138 aa13.37□□□□□ -0.27
ERCC2-212ENST00000591309 VCX2Q9H322 139 aa13.37□□□□□ -0.27
ERCC2-212ENST00000591309 LINC01549A6NIU2 74 aa13.35□□□□□ -0.27
ERCC2-212ENST00000591309 FAM229AH3BQW9 127 aa13.35□□□□□ -0.27
ERCC2-212ENST00000591309 NPSP0C0P6 89 aa13.35□□□□□ -0.27
ERCC2-212ENST00000591309 FAM104AQ969W3 186 aa13.35□□□□□ -0.27
ERCC2-212ENST00000591309 SLPIP03973 132 aa13.34□□□□□ -0.27
ERCC2-212ENST00000591309 DPH3Q96FX2 82 aa13.34□□□□□ -0.27
ERCC2-212ENST00000591309 CHAC1Q9BUX1 264 aa13.34□□□□□ -0.27
ERCC2-212ENST00000591309 APOBP04114 4563 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms