RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 HSPG2P98160 4391 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 LRP1BQ9NZR2 4599 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 NPYP01303 97 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 S100PP25815 95 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
SCAMP4-212ENST00000590266 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
SCAMP4-212ENST00000590266 DGAT2L7PQ6IED9 249 aa9.19□□□□□ -0.94
SCAMP4-212ENST00000590266 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
SCAMP4-212ENST00000590266 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
SCAMP4-212ENST00000590266 PRELID3AQ96N28 172 aa9.19□□□□□ -0.94
SCAMP4-212ENST00000590266 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
SCAMP4-212ENST00000590266 PPBPP02775 128 aa9.18□□□□□ -0.94
SCAMP4-212ENST00000590266 PRSS1P07477 247 aa9.18□□□□□ -0.94
SCAMP4-212ENST00000590266 XGP55808 180 aa9.18□□□□□ -0.94
SCAMP4-212ENST00000590266 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
SCAMP4-212ENST00000590266 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 TCAPO15273 167 aa9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 RNASE13Q5GAN3 156 aaKnown RBP9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 CBLN2Q8IUK8 224 aa9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 SMCO4Q9NRQ5 59 aa9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 FAM30AQ9NZY2 134 aa9.17□□□□□ -0.94
SCAMP4-212ENST00000590266 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 LOC389332A0A1B0GUA5 103 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 SCO1O75880 301 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 XCL1P47992 114 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 TMEM18Q96B42 140 aa9.16□□□□□ -0.94
SCAMP4-212ENST00000590266 PHOX2AO14813 284 aa9.15□□□□□ -0.94
SCAMP4-212ENST00000590266 RPL32P62910 135 aaKnown RBP9.15□□□□□ -0.94
SCAMP4-212ENST00000590266 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
SCAMP4-212ENST00000590266 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
SCAMP4-212ENST00000590266 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
SCAMP4-212ENST00000590266 TGIF2-C20orf24A0A0A6YYL0 155 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 EPM2AB3EWF7 344 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 CCL25O15444 150 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 RAB5AP20339 215 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 SS18Q15532 418 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
SCAMP4-212ENST00000590266 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
SCAMP4-212ENST00000590266 Q6ZUT4 128 aa9.13□□□□□ -0.95
SCAMP4-212ENST00000590266 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
SCAMP4-212ENST00000590266 AP5S1Q9NUS5 200 aa9.13□□□□□ -0.95
SCAMP4-212ENST00000590266 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
SCAMP4-212ENST00000590266 TRAV13-1A0A0B4J241 112 aa9.12□□□□□ -0.95
SCAMP4-212ENST00000590266 FOXI1Q12951 378 aa9.11□□□□□ -0.95
SCAMP4-212ENST00000590266 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
SCAMP4-212ENST00000590266 CFAP161Q6P656 301 aa9.11□□□□□ -0.95
SCAMP4-212ENST00000590266 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
SCAMP4-212ENST00000590266 LAMTOR2Q9Y2Q5 125 aa9.11□□□□□ -0.95
SCAMP4-212ENST00000590266 COX19Q49B96 90 aa9.1□□□□□ -0.95
SCAMP4-212ENST00000590266 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-212ENST00000590266 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
SCAMP4-212ENST00000590266 Q5VSD8 79 aa9.09□□□□□ -0.95
SCAMP4-212ENST00000590266 Q6ZSA8 131 aa9.09□□□□□ -0.95
SCAMP4-212ENST00000590266 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
SCAMP4-212ENST00000590266 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
SCAMP4-212ENST00000590266 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 COLCA2A8K830 154 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 SCXQ7RTU7 201 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 Q8N8P6 123 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
SCAMP4-212ENST00000590266 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
SCAMP4-212ENST00000590266 MALP21145 153 aa9.07□□□□□ -0.96
SCAMP4-212ENST00000590266 IFI27P40305 119 aaPredicted RBP9.07□□□□□ -0.96
SCAMP4-212ENST00000590266 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
SCAMP4-212ENST00000590266 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
SCAMP4-212ENST00000590266 IFITM10A6NMD0 228 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 MT-ND6P03923 174 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 SLPIP03973 132 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 INAFM2P0DMQ5 153 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 CHAC1Q9BUX1 264 aa9.06□□□□□ -0.96
SCAMP4-212ENST00000590266 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 COX7A2LO14548 114 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 C5orf38Q86SI9 138 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 CYSLTR1Q9Y271 337 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
SCAMP4-212ENST00000590266 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 MRPS36P82909 103 aaKnown RBP9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 ORMDL2Q53FV1 153 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 CIRBP-AS1Q8TBR5 109 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 DPH3Q96FX2 82 aa9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 MRPL18Q9H0U6 180 aaKnown RBP9.04□□□□□ -0.96
SCAMP4-212ENST00000590266 IGLV4-3A0A075B6K6 122 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms