RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
H3F3B-208ENST00000589599 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 PHOX2AO14813 284 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 TMEM136Q6ZRR5 245 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 ORMDL3Q8N138 153 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
H3F3B-208ENST00000589599 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
H3F3B-208ENST00000589599 hDV102S1A0JD36 115 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 ZNF664Q8N3J9 261 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 IMMP2LQ96T52 175 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 CDC42SE2Q9NRR3 84 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 AP5S1Q9NUS5 200 aa11.01□□□□□ -0.65
H3F3B-208ENST00000589599 HAMPP81172 84 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 Q6ZSA8 131 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 PRELID3AQ96N28 172 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 SEC11CQ9BY50 192 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 CTDSP1Q9GZU7 261 aa11□□□□□ -0.65
H3F3B-208ENST00000589599 LINC00959A0A1B0GUT2 108 aa10.99□□□□□ -0.65
H3F3B-208ENST00000589599 FAM229AH3BQW9 127 aa10.99□□□□□ -0.65
H3F3B-208ENST00000589599 NPYP01303 97 aa10.99□□□□□ -0.65
H3F3B-208ENST00000589599 SMR3BP02814 79 aaPredicted RBP10.99□□□□□ -0.65
H3F3B-208ENST00000589599 ADCYAP1P18509 176 aa10.99□□□□□ -0.65
H3F3B-208ENST00000589599 SS18Q15532 418 aa10.99□□□□□ -0.65
H3F3B-208ENST00000589599 CSDC2Q9Y534 153 aaKnown RBP10.99□□□□□ -0.65
H3F3B-208ENST00000589599 RAB5AP20339 215 aa10.98□□□□□ -0.65
H3F3B-208ENST00000589599 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
H3F3B-208ENST00000589599 XCL1P47992 114 aa10.97□□□□□ -0.65
H3F3B-208ENST00000589599 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
H3F3B-208ENST00000589599 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
H3F3B-208ENST00000589599 LAMTOR2Q9Y2Q5 125 aa10.97□□□□□ -0.65
H3F3B-208ENST00000589599 UBE2D4Q9Y2X8 147 aa10.97□□□□□ -0.65
H3F3B-208ENST00000589599 FAT1Q14517 4588 aa10.96□□□□□ -0.65
H3F3B-208ENST00000589599 CCL25O15444 150 aa10.96□□□□□ -0.65
H3F3B-208ENST00000589599 CNBPP62633 177 aaKnown RBP10.96□□□□□ -0.65
H3F3B-208ENST00000589599 S100PP25815 95 aa10.95□□□□□ -0.66
H3F3B-208ENST00000589599 FOXI1Q12951 378 aa10.95□□□□□ -0.66
H3F3B-208ENST00000589599 Q5VSD8 79 aa10.95□□□□□ -0.66
H3F3B-208ENST00000589599 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
H3F3B-208ENST00000589599 TRAV9-1A0A075B6T8 112 aa10.94□□□□□ -0.66
H3F3B-208ENST00000589599 C1orf196B1AJZ1 125 aa10.94□□□□□ -0.66
H3F3B-208ENST00000589599 CD164L2Q6UWJ8 174 aa10.94□□□□□ -0.66
H3F3B-208ENST00000589599 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
H3F3B-208ENST00000589599 MAP1LC3AQ9H492 121 aa10.94□□□□□ -0.66
H3F3B-208ENST00000589599 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
H3F3B-208ENST00000589599 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
H3F3B-208ENST00000589599 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
H3F3B-208ENST00000589599 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
H3F3B-208ENST00000589599 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
H3F3B-208ENST00000589599 HIGD2BQ4VC39 106 aa10.92□□□□□ -0.66
H3F3B-208ENST00000589599 SCXQ7RTU7 201 aa10.92□□□□□ -0.66
H3F3B-208ENST00000589599 TRAV13-1A0A0B4J241 112 aa10.91□□□□□ -0.66
H3F3B-208ENST00000589599 IGHV1-58A0A0C4DH39 117 aa10.91□□□□□ -0.66
H3F3B-208ENST00000589599 RNASE13Q5GAN3 156 aaKnown RBP10.91□□□□□ -0.66
H3F3B-208ENST00000589599 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
H3F3B-208ENST00000589599 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
H3F3B-208ENST00000589599 GVQW2A0A096LPI5 108 aaPredicted RBP10.9□□□□□ -0.66
H3F3B-208ENST00000589599 SLPIP03973 132 aa10.9□□□□□ -0.66
H3F3B-208ENST00000589599 Q6ZUT4 128 aa10.9□□□□□ -0.66
H3F3B-208ENST00000589599 Q8N8P6 123 aa10.9□□□□□ -0.66
H3F3B-208ENST00000589599 CARHSP1Q9Y2V2 147 aaKnown RBP10.9□□□□□ -0.66
H3F3B-208ENST00000589599 VPS13BQ7Z7G8 4022 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 COX7A2LO14548 114 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 MALP21145 153 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
H3F3B-208ENST00000589599 RHEBQ15382 184 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 CIRBP-AS1Q8TBR5 109 aa10.89□□□□□ -0.67
H3F3B-208ENST00000589599 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
H3F3B-208ENST00000589599 IFI27P40305 119 aaPredicted RBP10.88□□□□□ -0.67
H3F3B-208ENST00000589599 LINC00528Q8N1L1 170 aa10.88□□□□□ -0.67
H3F3B-208ENST00000589599 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
H3F3B-208ENST00000589599 RPS10P5Q9NQ39 176 aa10.88□□□□□ -0.67
H3F3B-208ENST00000589599 K7EMI3 77 aa10.87□□□□□ -0.67
H3F3B-208ENST00000589599 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
H3F3B-208ENST00000589599 NXT2Q9NPJ8 142 aaKnown RBP10.87□□□□□ -0.67
H3F3B-208ENST00000589599 SRRM2Q9UQ35 2752 aaKnown RBP10.87□□□□□ -0.67
H3F3B-208ENST00000589599 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
H3F3B-208ENST00000589599 COX19Q49B96 90 aa10.86□□□□□ -0.67
H3F3B-208ENST00000589599 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
H3F3B-208ENST00000589599 OPRPNQ99935 248 aaPredicted RBP10.86□□□□□ -0.67
H3F3B-208ENST00000589599 PYGO1Q9Y3Y4 419 aa10.86□□□□□ -0.67
H3F3B-208ENST00000589599 IFITM10A6NMD0 228 aa10.85□□□□□ -0.67
H3F3B-208ENST00000589599 G0S2P27469 103 aa10.85□□□□□ -0.67
H3F3B-208ENST00000589599 NDUFA5Q16718 116 aa10.85□□□□□ -0.67
H3F3B-208ENST00000589599 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
H3F3B-208ENST00000589599 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
H3F3B-208ENST00000589599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
H3F3B-208ENST00000589599 APOMO95445 188 aa10.84□□□□□ -0.67
H3F3B-208ENST00000589599 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
H3F3B-208ENST00000589599 PKIGQ9Y2B9 76 aa10.84□□□□□ -0.67
H3F3B-208ENST00000589599 APOC3P02656 99 aa10.83□□□□□ -0.68
H3F3B-208ENST00000589599 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
H3F3B-208ENST00000589599 TMEM141Q96I45 108 aa10.83□□□□□ -0.68
H3F3B-208ENST00000589599 MT-ND6P03923 174 aa10.82□□□□□ -0.68
H3F3B-208ENST00000589599 COX6A2Q02221 97 aa10.82□□□□□ -0.68
H3F3B-208ENST00000589599 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
H3F3B-208ENST00000589599 Q6ZN92 141 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms