RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 SMIM7Q9BQ49 75 aa9.45□□□□□ -0.9
HDAC5-206ENST00000587776 IGHV1-58A0A0C4DH39 117 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 CCL25O15444 150 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 PMCHP20382 165 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 CT83Q5H943 113 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 Q6ZRP5 223 aa9.44□□□□□ -0.9
HDAC5-206ENST00000587776 TNXBP22105 4242 aa9.43□□□□□ -0.9
HDAC5-206ENST00000587776 ZNF727A8MUV8 499 aa9.43□□□□□ -0.9
HDAC5-206ENST00000587776 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
HDAC5-206ENST00000587776 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
HDAC5-206ENST00000587776 LRP2P98164 4655 aa9.43□□□□□ -0.9
HDAC5-206ENST00000587776 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 A8MWL6 223 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 I3L3M4 83 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 SS18Q15532 418 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 OSTCQ9NRP0 149 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
HDAC5-206ENST00000587776 KRTAP10-8P60410 259 aa9.41□□□□□ -0.9
HDAC5-206ENST00000587776 SYCNQ0VAF6 134 aa9.41□□□□□ -0.9
HDAC5-206ENST00000587776 MRAP2Q96G30 205 aa9.41□□□□□ -0.9
HDAC5-206ENST00000587776 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
HDAC5-206ENST00000587776 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
HDAC5-206ENST00000587776 V9GYV3 84 aa9.4□□□□□ -0.9
HDAC5-206ENST00000587776 CAMPP49913 170 aa9.39□□□□□ -0.91
HDAC5-206ENST00000587776 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
HDAC5-206ENST00000587776 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
HDAC5-206ENST00000587776 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
HDAC5-206ENST00000587776 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
HDAC5-206ENST00000587776 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 FAM231BA6NCW3 169 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 MALP21145 153 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 FAM74A3Q4VXF1 159 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
HDAC5-206ENST00000587776 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
HDAC5-206ENST00000587776 TSHBP01222 138 aa9.37□□□□□ -0.91
HDAC5-206ENST00000587776 RAB14P61106 215 aa9.37□□□□□ -0.91
HDAC5-206ENST00000587776 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC5-206ENST00000587776 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 ESDP10768 282 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 ZNF664Q8N3J9 261 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
HDAC5-206ENST00000587776 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 C7orf77A4D0Y5 90 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 MT-ND6P03923 174 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 PEA15Q15121 130 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 MRPL52Q86TS9 123 aaKnown RBP9.35□□□□□ -0.91
HDAC5-206ENST00000587776 NUP35Q8NFH5 326 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
HDAC5-206ENST00000587776 COX7A2LO14548 114 aa9.34□□□□□ -0.91
HDAC5-206ENST00000587776 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.91
HDAC5-206ENST00000587776 ADIRFQ15847 76 aa9.34□□□□□ -0.91
HDAC5-206ENST00000587776 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
HDAC5-206ENST00000587776 RAB4AP20338 218 aa9.33□□□□□ -0.92
HDAC5-206ENST00000587776 FCER1GP30273 86 aa9.33□□□□□ -0.92
HDAC5-206ENST00000587776 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 SMIM27A0A1W2PRY6 76 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 APOMO95445 188 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
HDAC5-206ENST00000587776 TRBV27A0A0K0K1C4 114 aa9.31□□□□□ -0.92
HDAC5-206ENST00000587776 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
HDAC5-206ENST00000587776 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
HDAC5-206ENST00000587776 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
HDAC5-206ENST00000587776 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
HDAC5-206ENST00000587776 TRAV13-1A0A0B4J241 112 aa9.3□□□□□ -0.92
HDAC5-206ENST00000587776 POLR2KP53803 58 aaKnown RBP9.3□□□□□ -0.92
HDAC5-206ENST00000587776 RIGQ13278 110 aa9.3□□□□□ -0.92
HDAC5-206ENST00000587776 NRACQ8N912 160 aa9.29□□□□□ -0.92
HDAC5-206ENST00000587776 SMKR1H3BMG3 65 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.28□□□□□ -0.92
HDAC5-206ENST00000587776 VCYO14598 125 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 SPAG11BQ08648 103 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
HDAC5-206ENST00000587776 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 C2orf48Q96LS8 159 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
HDAC5-206ENST00000587776 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
HDAC5-206ENST00000587776 UBE2D4Q9Y2X8 147 aa9.27□□□□□ -0.93
HDAC5-206ENST00000587776 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
HDAC5-206ENST00000587776 PPP1R17O96001 155 aa9.26□□□□□ -0.93
HDAC5-206ENST00000587776 MRPL51Q4U2R6 128 aaKnown RBP9.26□□□□□ -0.93
HDAC5-206ENST00000587776 FAM104BQ5XKR9 115 aa9.26□□□□□ -0.93
HDAC5-206ENST00000587776 Q6ZUT4 128 aa9.26□□□□□ -0.93
HDAC5-206ENST00000587776 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
HDAC5-206ENST00000587776 TMEM18Q96B42 140 aa9.26□□□□□ -0.93
HDAC5-206ENST00000587776 A0A1B0GXF2 115 aa9.25□□□□□ -0.93
HDAC5-206ENST00000587776 SUMO2P61956 95 aaKnown RBP9.25□□□□□ -0.93
HDAC5-206ENST00000587776 IFITM2Q01629 132 aa9.24□□□□□ -0.93
HDAC5-206ENST00000587776 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
HDAC5-206ENST00000587776 CLLU1Q5K131 121 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms