RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 RNF183Q96D59 192 aa12.18□□□□□ -0.46
PRKCSH-205ENST00000587327 CHD6Q8TD26 2715 aa12.17□□□□□ -0.46
PRKCSH-205ENST00000587327 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
PRKCSH-205ENST00000587327 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 ICOSQ9Y6W8 199 aa12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 AKAP9Q99996 3911 aa12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 TRBV10-2A0A0K0K1G8 114 aa12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 TIRAPP58753 221 aa12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 NTN5Q8WTR8 489 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 SONP18583 2426 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-205ENST00000587327 IGLV5-45A0A087WSX0 123 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 TIMM17BO60830 172 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 NPC2P61916 151 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 TMEM86BQ8N661 226 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 CCDC168Q8NDH2 2452 aa12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 FLNAP21333 2647 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-205ENST00000587327 HIST2H2BDQ6DRA6 164 aa12.14□□□□□ -0.47
PRKCSH-205ENST00000587327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-205ENST00000587327 COX6CP09669 75 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 IFITM1P13164 125 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 Q6ZSV7 163 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 NDUFA1O15239 70 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 RPL13AP40429 203 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
PRKCSH-205ENST00000587327 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
PRKCSH-205ENST00000587327 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
PRKCSH-205ENST00000587327 COX6A2Q02221 97 aa12.12□□□□□ -0.47
PRKCSH-205ENST00000587327 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 KRTAP1-1Q07627 177 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 H7C423 109 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 ODF3L2Q3SX64 289 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 DAND5Q8N907 189 aa12.11□□□□□ -0.47
PRKCSH-205ENST00000587327 PDZD2O15018 2839 aa12.1□□□□□ -0.47
PRKCSH-205ENST00000587327 KMT2BQ9UMN6 2715 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-205ENST00000587327 HERVK_113P63121 156 aa12.1□□□□□ -0.47
PRKCSH-205ENST00000587327 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
PRKCSH-205ENST00000587327 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 C2orf82Q6UX34 121 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 C1orf158Q8N1D5 194 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 CITED1Q99966 193 aa12.09□□□□□ -0.47
PRKCSH-205ENST00000587327 TRGV1A0A0A0MS02 117 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 STHQ8IWL8 128 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 CLEC2BQ92478 149 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 UBE2WQ96B02 151 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 LST1O00453 97 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
PRKCSH-205ENST00000587327 H3BT86 120 aa12.07□□□□□ -0.48
PRKCSH-205ENST00000587327 J3QKU1 62 aa12.07□□□□□ -0.48
PRKCSH-205ENST00000587327 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
PRKCSH-205ENST00000587327 Q9H8V8 135 aa12.07□□□□□ -0.48
PRKCSH-205ENST00000587327 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
PRKCSH-205ENST00000587327 TRAV25A0A0B4J276 109 aa12.06□□□□□ -0.48
PRKCSH-205ENST00000587327 CITED2Q99967 270 aaPredicted RBP12.06□□□□□ -0.48
PRKCSH-205ENST00000587327 LINC00308Q8TCZ7 52 aa12.06□□□□□ -0.48
PRKCSH-205ENST00000587327 TRAV26-1A0A087WT03 109 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 CUBNO60494 3623 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 NDUFA7O95182 113 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 DAZ2Q13117 558 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
PRKCSH-205ENST00000587327 HELZ2Q9BYK8 2649 aaKnown RBP12.04□□□□□ -0.48
PRKCSH-205ENST00000587327 SMIM1B2RUZ4 78 aa12.04□□□□□ -0.48
PRKCSH-205ENST00000587327 K7EQD1 137 aa12.04□□□□□ -0.48
PRKCSH-205ENST00000587327 SNCGO76070 127 aa12.04□□□□□ -0.48
PRKCSH-205ENST00000587327 Q6ZTI0 123 aa12.03□□□□□ -0.48
PRKCSH-205ENST00000587327 C11orf44Q8N8P7 122 aa12.03□□□□□ -0.48
PRKCSH-205ENST00000587327 ZNF625Q96I27 306 aaPredicted RBP12.03□□□□□ -0.48
PRKCSH-205ENST00000587327 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
PRKCSH-205ENST00000587327 ACANP16112 2415 aa12.03□□□□□ -0.48
PRKCSH-205ENST00000587327 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.48
PRKCSH-205ENST00000587327 CRLF1O75462 422 aa12.02□□□□□ -0.48
PRKCSH-205ENST00000587327 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.48
PRKCSH-205ENST00000587327 ANK3Q12955 4377 aaKnown RBP12.02□□□□□ -0.48
PRKCSH-205ENST00000587327 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE2BQ13066 116 aa12.02□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE2EQ4V326 116 aa12.02□□□□□ -0.49
PRKCSH-205ENST00000587327 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.49
PRKCSH-205ENST00000587327 NF1P21359 2839 aa12.01□□□□□ -0.49
PRKCSH-205ENST00000587327 A0A1W2PRX2 142 aa12.01□□□□□ -0.49
PRKCSH-205ENST00000587327 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
PRKCSH-205ENST00000587327 ANAPC13Q9BS18 74 aa12.01□□□□□ -0.49
PRKCSH-205ENST00000587327 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
PRKCSH-205ENST00000587327 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
PRKCSH-205ENST00000587327 F5H768 121 aa12□□□□□ -0.49
PRKCSH-205ENST00000587327 DEFB121Q5J5C9 76 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms