RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ERASQ7Z444 233 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 Q8N976 141 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 RMI2Q96E14 147 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 TMEM141Q96I45 108 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 SCGB3A1Q96QR1 104 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 SERF1AO75920 110 aa9.68□□□□□ -0.86
SKA2-205ENST00000580541 MRPS36P82909 103 aaKnown RBP9.68□□□□□ -0.86
SKA2-205ENST00000580541 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
SKA2-205ENST00000580541 TIMM17AQ99595 171 aa9.68□□□□□ -0.86
SKA2-205ENST00000580541 CDC42SE2Q9NRR3 84 aa9.68□□□□□ -0.86
SKA2-205ENST00000580541 COX11Q9Y6N1 276 aa9.68□□□□□ -0.86
SKA2-205ENST00000580541 IGLV4-60A0A075B6I1 120 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
SKA2-205ENST00000580541 CCL25O15444 150 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 ATP5LO75964 103 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 S100A6P06703 90 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 NDUFA6P56556 154 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 MIAQ16674 131 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 VCX2Q9H322 139 aa9.67□□□□□ -0.86
SKA2-205ENST00000580541 TRAV8-4A0A0B4J246 113 aa9.66□□□□□ -0.86
SKA2-205ENST00000580541 M0R2N4 97 aa9.66□□□□□ -0.86
SKA2-205ENST00000580541 REG3AQ06141 175 aa9.66□□□□□ -0.86
SKA2-205ENST00000580541 COA6Q5JTJ3 125 aaKnown RBP9.66□□□□□ -0.86
SKA2-205ENST00000580541 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
SKA2-205ENST00000580541 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
SKA2-205ENST00000580541 IGIPA6NJ69 53 aa9.65□□□□□ -0.86
SKA2-205ENST00000580541 TEX43Q6ZNM6 134 aa9.65□□□□□ -0.86
SKA2-205ENST00000580541 Q6ZR54 194 aa9.65□□□□□ -0.86
SKA2-205ENST00000580541 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
SKA2-205ENST00000580541 PRR34Q9NV39 138 aa9.65□□□□□ -0.86
SKA2-205ENST00000580541 SS18Q15532 418 aa9.64□□□□□ -0.87
SKA2-205ENST00000580541 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
SKA2-205ENST00000580541 Q8N3U1 123 aa9.64□□□□□ -0.87
SKA2-205ENST00000580541 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
SKA2-205ENST00000580541 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
SKA2-205ENST00000580541 PMCHL1Q16048 86 aa9.63□□□□□ -0.87
SKA2-205ENST00000580541 PDZD11Q5EBL8 140 aa9.63□□□□□ -0.87
SKA2-205ENST00000580541 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
SKA2-205ENST00000580541 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
SKA2-205ENST00000580541 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
SKA2-205ENST00000580541 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
SKA2-205ENST00000580541 FAM19A2Q8N3H0 131 aa9.62□□□□□ -0.87
SKA2-205ENST00000580541 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
SKA2-205ENST00000580541 Q9HAA7 133 aa9.62□□□□□ -0.87
SKA2-205ENST00000580541 A0A096LNJ9 63 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 IGKV3OR2-268A0A0C4DH90 116 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 IFITM10A6NMD0 228 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 PSCAO43653 123 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 SEC11AP67812 179 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 Q6ZUT4 128 aa9.61□□□□□ -0.87
SKA2-205ENST00000580541 LYSTQ99698 3801 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 LINC00959A0A1B0GUT2 108 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 NUPR1O60356 82 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 PRSS1P07477 247 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 LINC00310P59036 64 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 PMVKQ15126 192 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 CLPSL2Q6UWE3 100 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 AMELXQ99217 191 aa9.6□□□□□ -0.87
SKA2-205ENST00000580541 OPRPNQ99935 248 aaPredicted RBP9.6□□□□□ -0.87
SKA2-205ENST00000580541 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
SKA2-205ENST00000580541 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
SKA2-205ENST00000580541 S100A2P29034 98 aa9.59□□□□□ -0.87
SKA2-205ENST00000580541 KRTAP1-5Q9BYS1 174 aa9.59□□□□□ -0.87
SKA2-205ENST00000580541 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
SKA2-205ENST00000580541 FABP4P15090 132 aa9.58□□□□□ -0.88
SKA2-205ENST00000580541 SMCPP49901 116 aaPredicted RBP9.58□□□□□ -0.88
SKA2-205ENST00000580541 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
SKA2-205ENST00000580541 MAP1LC3CQ9BXW4 147 aa9.58□□□□□ -0.88
SKA2-205ENST00000580541 BAALCQ8WXS3 180 aa9.57□□□□□ -0.88
SKA2-205ENST00000580541 CHCHD10Q8WYQ3 142 aaPredicted RBP9.57□□□□□ -0.88
SKA2-205ENST00000580541 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
SKA2-205ENST00000580541 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
SKA2-205ENST00000580541 CD164L2Q6UWJ8 174 aa9.56□□□□□ -0.88
SKA2-205ENST00000580541 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
SKA2-205ENST00000580541 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 PRSS29PA6NIE9 313 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 XCL1P47992 114 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 UBE2D1P51668 147 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 HERVK_113P63121 156 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
SKA2-205ENST00000580541 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
SKA2-205ENST00000580541 DNAH1Q9P2D7 4330 aa9.54□□□□□ -0.88
SKA2-205ENST00000580541 EREGO14944 169 aa9.54□□□□□ -0.88
SKA2-205ENST00000580541 SNRPEP62304 92 aaKnown RBP9.54□□□□□ -0.88
SKA2-205ENST00000580541 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
SKA2-205ENST00000580541 GAGE12HA6NDE8 117 aa9.53□□□□□ -0.88
SKA2-205ENST00000580541 LINC00173Q6ZV60 143 aa9.53□□□□□ -0.88
SKA2-205ENST00000580541 FAM19A3Q7Z5A8 133 aa9.53□□□□□ -0.88
SKA2-205ENST00000580541 KMT2AQ03164 3969 aa9.53□□□□□ -0.88
SKA2-205ENST00000580541 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 C5orf52A6NGY3 159 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 COX7A2LO14548 114 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 APOMO95445 188 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 MALP21145 153 aa9.52□□□□□ -0.89
SKA2-205ENST00000580541 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms