RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 C1orf43Q9BWL3 253 aa10.24□□□□□ -0.77
IFT20-206ENST00000578122 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
IFT20-206ENST00000578122 RAB5AP20339 215 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 FABP9Q0Z7S8 132 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 TMEM18Q96B42 140 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 DNAH2Q9P225 4427 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 FRAS1Q86XX4 4008 aa10.23□□□□□ -0.77
IFT20-206ENST00000578122 DNAH17Q9UFH2 4485 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 LRCOL1A6NCL2 159 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
IFT20-206ENST00000578122 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 Q8N8P6 123 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 YPEL4Q96NS1 127 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 BIRC6Q9NR09 4857 aa10.22□□□□□ -0.77
IFT20-206ENST00000578122 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
IFT20-206ENST00000578122 SPATA12Q7Z6I5 190 aa10.21□□□□□ -0.77
IFT20-206ENST00000578122 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.77
IFT20-206ENST00000578122 TRAV8-4A0A0B4J246 113 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 CBLN2Q8IUK8 224 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 ALKBH7Q9BT30 221 aaPredicted RBP10.2□□□□□ -0.78
IFT20-206ENST00000578122 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
IFT20-206ENST00000578122 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
IFT20-206ENST00000578122 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
IFT20-206ENST00000578122 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
IFT20-206ENST00000578122 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
IFT20-206ENST00000578122 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
IFT20-206ENST00000578122 CSDC2Q9Y534 153 aaKnown RBP10.19□□□□□ -0.78
IFT20-206ENST00000578122 LECT2O14960 151 aa10.18□□□□□ -0.78
IFT20-206ENST00000578122 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
IFT20-206ENST00000578122 WFDC2Q14508 124 aa10.18□□□□□ -0.78
IFT20-206ENST00000578122 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
IFT20-206ENST00000578122 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
IFT20-206ENST00000578122 FAT2Q9NYQ8 4349 aa10.17□□□□□ -0.78
IFT20-206ENST00000578122 K7EMI3 77 aa10.17□□□□□ -0.78
IFT20-206ENST00000578122 SPANXA1Q9NS26 97 aa10.17□□□□□ -0.78
IFT20-206ENST00000578122 C16orf90A8MZG2 172 aa10.16□□□□□ -0.78
IFT20-206ENST00000578122 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
IFT20-206ENST00000578122 Q8N814 137 aa10.16□□□□□ -0.78
IFT20-206ENST00000578122 PRSS3P2Q8NHM4 247 aa10.16□□□□□ -0.78
IFT20-206ENST00000578122 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.78
IFT20-206ENST00000578122 Q6ZUT4 128 aa10.15□□□□□ -0.78
IFT20-206ENST00000578122 CHCHD10Q8WYQ3 142 aaPredicted RBP10.15□□□□□ -0.78
IFT20-206ENST00000578122 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
IFT20-206ENST00000578122 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
IFT20-206ENST00000578122 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
IFT20-206ENST00000578122 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
IFT20-206ENST00000578122 CYSLTR1Q9Y271 337 aa10.14□□□□□ -0.79
IFT20-206ENST00000578122 USP17L23D6RBM5 183 aa10.13□□□□□ -0.79
IFT20-206ENST00000578122 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
IFT20-206ENST00000578122 SS18Q15532 418 aa10.13□□□□□ -0.79
IFT20-206ENST00000578122 C2orf66Q6UXQ4 117 aa10.13□□□□□ -0.79
IFT20-206ENST00000578122 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
IFT20-206ENST00000578122 G0S2P27469 103 aa10.12□□□□□ -0.79
IFT20-206ENST00000578122 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
IFT20-206ENST00000578122 FA2HQ7L5A8 372 aa10.12□□□□□ -0.79
IFT20-206ENST00000578122 FAM104AQ969W3 186 aa10.12□□□□□ -0.79
IFT20-206ENST00000578122 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
IFT20-206ENST00000578122 PYGO1Q9Y3Y4 419 aa10.12□□□□□ -0.79
IFT20-206ENST00000578122 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
IFT20-206ENST00000578122 CCL25O15444 150 aa10.11□□□□□ -0.79
IFT20-206ENST00000578122 EIF4EBP3O60516 100 aaPredicted RBP10.11□□□□□ -0.79
IFT20-206ENST00000578122 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.1□□□□□ -0.79
IFT20-206ENST00000578122 IGLV5-52A0A0A0MRZ9 124 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 XCL1P47992 114 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 KRTAP9-9Q9BYP9 154 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 KRTAP9-4Q9BYQ2 154 aa10.1□□□□□ -0.79
IFT20-206ENST00000578122 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
IFT20-206ENST00000578122 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
IFT20-206ENST00000578122 FOXI1Q12951 378 aa10.09□□□□□ -0.79
IFT20-206ENST00000578122 PKD1P98161 4303 aa10.09□□□□□ -0.79
IFT20-206ENST00000578122 COLCA2A8K830 154 aa10.08□□□□□ -0.8
IFT20-206ENST00000578122 SCO1O75880 301 aa10.08□□□□□ -0.8
IFT20-206ENST00000578122 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
IFT20-206ENST00000578122 TMEM141Q96I45 108 aa10.08□□□□□ -0.8
IFT20-206ENST00000578122 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 IFITM10A6NMD0 228 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 PRSS1P07477 247 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 NPSP0C0P6 89 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 GCSHP23434 173 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 CFAP161Q6P656 301 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 CD164L2Q6UWJ8 174 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 AP5S1Q9NUS5 200 aa10.07□□□□□ -0.8
IFT20-206ENST00000578122 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 TRGC2P03986 189 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 LINC00614P0C842 121 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 RAB5BP61020 215 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 Q6ZN92 141 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
IFT20-206ENST00000578122 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
IFT20-206ENST00000578122 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
IFT20-206ENST00000578122 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
IFT20-206ENST00000578122 TEX43Q6ZNM6 134 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms