RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 A0A087WTM6 91 aa10.81□□□□□ -0.68
PFN1-203ENST00000574872 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
PFN1-203ENST00000574872 MAPKAPK5-AS1Q8N8E1 139 aa10.81□□□□□ -0.68
PFN1-203ENST00000574872 LECT2O14960 151 aa10.8□□□□□ -0.68
PFN1-203ENST00000574872 PRSS3P2Q8NHM4 247 aa10.8□□□□□ -0.68
PFN1-203ENST00000574872 BAALCQ8WXS3 180 aa10.8□□□□□ -0.68
PFN1-203ENST00000574872 COX11Q9Y6N1 276 aa10.8□□□□□ -0.68
PFN1-203ENST00000574872 PKHD1P08F94 4074 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 SMAGPQ0VAQ4 97 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 WFDC2Q14508 124 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 Q6ZUT4 128 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 ZNF664Q8N3J9 261 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
PFN1-203ENST00000574872 LRCOL1A6NCL2 159 aa10.78□□□□□ -0.68
PFN1-203ENST00000574872 EREGO14944 169 aa10.78□□□□□ -0.68
PFN1-203ENST00000574872 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
PFN1-203ENST00000574872 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
PFN1-203ENST00000574872 SPATA12Q7Z6I5 190 aa10.78□□□□□ -0.68
PFN1-203ENST00000574872 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
PFN1-203ENST00000574872 KRTAP10-2P60368 255 aa10.77□□□□□ -0.69
PFN1-203ENST00000574872 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
PFN1-203ENST00000574872 CSDC2Q9Y534 153 aaKnown RBP10.77□□□□□ -0.69
PFN1-203ENST00000574872 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 COLCA2A8K830 154 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 K7EMI3 77 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 KRTAP26-1Q6PEX3 210 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 C2orf66Q6UXQ4 117 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 FA2HQ7L5A8 372 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 C18orf32Q8TCD1 76 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 CYSLTR1Q9Y271 337 aa10.76□□□□□ -0.69
PFN1-203ENST00000574872 ATP6V1G1O75348 118 aa10.75□□□□□ -0.69
PFN1-203ENST00000574872 TRGC2P03986 189 aa10.75□□□□□ -0.69
PFN1-203ENST00000574872 CHCHD10Q8WYQ3 142 aaPredicted RBP10.75□□□□□ -0.69
PFN1-203ENST00000574872 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
PFN1-203ENST00000574872 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
PFN1-203ENST00000574872 LINC00959A0A1B0GUT2 108 aa10.74□□□□□ -0.69
PFN1-203ENST00000574872 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
PFN1-203ENST00000574872 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
PFN1-203ENST00000574872 XCL1P47992 114 aa10.73□□□□□ -0.69
PFN1-203ENST00000574872 Q8N814 137 aa10.73□□□□□ -0.69
PFN1-203ENST00000574872 DNAH5Q8TE73 4624 aa10.73□□□□□ -0.69
PFN1-203ENST00000574872 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
PFN1-203ENST00000574872 LINC01546A6NGU7 62 aa10.72□□□□□ -0.69
PFN1-203ENST00000574872 CCL25O15444 150 aa10.72□□□□□ -0.69
PFN1-203ENST00000574872 MRPS36P82909 103 aaKnown RBP10.72□□□□□ -0.69
PFN1-203ENST00000574872 SS18Q15532 418 aa10.72□□□□□ -0.69
PFN1-203ENST00000574872 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
PFN1-203ENST00000574872 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
PFN1-203ENST00000574872 USP17L23D6RBM5 183 aa10.71□□□□□ -0.69
PFN1-203ENST00000574872 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
PFN1-203ENST00000574872 AP5S1Q9NUS5 200 aa10.71□□□□□ -0.69
PFN1-203ENST00000574872 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.69
PFN1-203ENST00000574872 IFITM10A6NMD0 228 aa10.7□□□□□ -0.7
PFN1-203ENST00000574872 C16orf90A8MZG2 172 aa10.7□□□□□ -0.7
PFN1-203ENST00000574872 LINC00614P0C842 121 aa10.7□□□□□ -0.7
PFN1-203ENST00000574872 S100A1P23297 94 aa10.7□□□□□ -0.7
PFN1-203ENST00000574872 TMEM141Q96I45 108 aa10.7□□□□□ -0.7
PFN1-203ENST00000574872 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
PFN1-203ENST00000574872 G0S2P27469 103 aa10.69□□□□□ -0.7
PFN1-203ENST00000574872 FOXI1Q12951 378 aa10.69□□□□□ -0.7
PFN1-203ENST00000574872 PMCHL1Q16048 86 aa10.69□□□□□ -0.7
PFN1-203ENST00000574872 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
PFN1-203ENST00000574872 C1orf196B1AJZ1 125 aa10.68□□□□□ -0.7
PFN1-203ENST00000574872 RAB5BP61020 215 aa10.68□□□□□ -0.7
PFN1-203ENST00000574872 SCGB3A1Q96QR1 104 aa10.68□□□□□ -0.7
PFN1-203ENST00000574872 IGLV5-52A0A0A0MRZ9 124 aa10.67□□□□□ -0.7
PFN1-203ENST00000574872 Q6ZN92 141 aa10.67□□□□□ -0.7
PFN1-203ENST00000574872 TEX43Q6ZNM6 134 aa10.67□□□□□ -0.7
PFN1-203ENST00000574872 PGPEP1Q9NXJ5 209 aa10.67□□□□□ -0.7
PFN1-203ENST00000574872 LRP1BQ9NZR2 4599 aa10.67□□□□□ -0.7
PFN1-203ENST00000574872 A0A096LNJ9 63 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 C14orf177Q52M58 125 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 CD164L2Q6UWJ8 174 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 VCX2Q9H322 139 aa10.66□□□□□ -0.7
PFN1-203ENST00000574872 PRSS1P07477 247 aa10.65□□□□□ -0.7
PFN1-203ENST00000574872 CDPF1Q6NVV7 123 aa10.65□□□□□ -0.7
PFN1-203ENST00000574872 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.7
PFN1-203ENST00000574872 ERASQ7Z444 233 aa10.65□□□□□ -0.7
PFN1-203ENST00000574872 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
PFN1-203ENST00000574872 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
PFN1-203ENST00000574872 hDV102S1A0JD36 115 aa10.64□□□□□ -0.71
PFN1-203ENST00000574872 HBDP02042 147 aa10.64□□□□□ -0.71
PFN1-203ENST00000574872 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
PFN1-203ENST00000574872 C15orf56Q8N910 161 aa10.64□□□□□ -0.71
PFN1-203ENST00000574872 AMELXQ99217 191 aa10.64□□□□□ -0.71
PFN1-203ENST00000574872 NPSP0C0P6 89 aa10.63□□□□□ -0.71
PFN1-203ENST00000574872 C5orf38Q86SI9 138 aa10.63□□□□□ -0.71
PFN1-203ENST00000574872 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
PFN1-203ENST00000574872 LINC01549A6NIU2 74 aa10.62□□□□□ -0.71
PFN1-203ENST00000574872 COX7A2LO14548 114 aa10.62□□□□□ -0.71
PFN1-203ENST00000574872 UBE2D1P51668 147 aa10.62□□□□□ -0.71
PFN1-203ENST00000574872 PAPPA-AS1Q5QFB9 102 aa10.62□□□□□ -0.71
PFN1-203ENST00000574872 CFAP161Q6P656 301 aa10.62□□□□□ -0.71
PFN1-203ENST00000574872 MALP21145 153 aa10.61□□□□□ -0.71
PFN1-203ENST00000574872 GCSHP23434 173 aa10.61□□□□□ -0.71
PFN1-203ENST00000574872 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 737.5 ms