RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DEFB4AO15263 64 aa19.96■□□□□ 0.79
CTDNEP1-210ENST00000574322 K7EIL1 84 aa19.96■□□□□ 0.79
CTDNEP1-210ENST00000574322 TMEM97Q5BJF2 176 aa19.96■□□□□ 0.79
CTDNEP1-210ENST00000574322 SPART-AS1P0CW21 52 aa19.95■□□□□ 0.78
CTDNEP1-210ENST00000574322 CHAC1Q9BUX1 264 aa19.95■□□□□ 0.78
CTDNEP1-210ENST00000574322 HIGD1BQ9P298 99 aa19.95■□□□□ 0.78
CTDNEP1-210ENST00000574322 HERVK_113P61574 105 aa19.94■□□□□ 0.78
CTDNEP1-210ENST00000574322 DAD1P61803 113 aa19.94■□□□□ 0.78
CTDNEP1-210ENST00000574322 TMEM243Q9BU79 118 aa19.94■□□□□ 0.78
CTDNEP1-210ENST00000574322 HINT1P49773 126 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-210ENST00000574322 Q6ZUT4 128 aa19.93■□□□□ 0.78
CTDNEP1-210ENST00000574322 MPV17L2Q567V2 206 aa19.93■□□□□ 0.78
CTDNEP1-210ENST00000574322 TTTY13Q9BZ97 58 aa19.93■□□□□ 0.78
CTDNEP1-210ENST00000574322 CELA1Q9UNI1 258 aa19.93■□□□□ 0.78
CTDNEP1-210ENST00000574322 TRBV25-1A0A075B6N4 114 aa19.92■□□□□ 0.78
CTDNEP1-210ENST00000574322 A0A0J9YXV3 536 aa19.92■□□□□ 0.78
CTDNEP1-210ENST00000574322 TEX48A0A1B0GUV7 120 aa19.92■□□□□ 0.78
CTDNEP1-210ENST00000574322 BATFQ16520 125 aa19.91■□□□□ 0.78
CTDNEP1-210ENST00000574322 TMEM170BQ5T4T1 132 aa19.91■□□□□ 0.78
CTDNEP1-210ENST00000574322 DGAT2L7PQ6IED9 249 aa19.91■□□□□ 0.78
CTDNEP1-210ENST00000574322 MAPKAPK5-AS1Q8N8E1 139 aa19.91■□□□□ 0.78
CTDNEP1-210ENST00000574322 TRAV8-6A0A0B4J262 113 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 GYPEP15421 78 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 DEFB121Q5J5C9 76 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 COL5A1-AS1Q5SY13 56 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 TRBV6-8A0A0A6YYG3 113 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 ATP5G1P05496 136 aa19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 ZNF22P17026 224 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-210ENST00000574322 TINCRA0A1B0GVN0 87 aa19.89■□□□□ 0.77
CTDNEP1-210ENST00000574322 BVES-AS1Q5T3Y7 98 aa19.89■□□□□ 0.77
CTDNEP1-210ENST00000574322 MRAPQ8TCY5 172 aa19.89■□□□□ 0.77
CTDNEP1-210ENST00000574322 TMEM223A0PJW6 202 aa19.88■□□□□ 0.77
CTDNEP1-210ENST00000574322 RNASE13Q5GAN3 156 aaKnown RBP19.88■□□□□ 0.77
CTDNEP1-210ENST00000574322 ATP6V0E2Q8NHE4 81 aa19.88■□□□□ 0.77
CTDNEP1-210ENST00000574322 PAX4O43316 350 aa19.87■□□□□ 0.77
CTDNEP1-210ENST00000574322 UBE2D1P51668 147 aa19.87■□□□□ 0.77
CTDNEP1-210ENST00000574322 MYMXA0A1B0GTQ4 84 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 HSD52Q0P140 79 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 FAM19A3Q7Z5A8 133 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 VSIG2Q96IQ7 327 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 CDC42SE2Q9NRR3 84 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 MEGF8Q7Z7M0 2845 aa19.86■□□□□ 0.77
CTDNEP1-210ENST00000574322 UBE2L6O14933 153 aa19.85■□□□□ 0.77
CTDNEP1-210ENST00000574322 ZNF25P17030 456 aaPredicted RBP19.85■□□□□ 0.77
CTDNEP1-210ENST00000574322 TIRAPP58753 221 aa19.84■□□□□ 0.77
CTDNEP1-210ENST00000574322 OR5A1Q8NGJ0 315 aa19.84■□□□□ 0.77
CTDNEP1-210ENST00000574322 AMMECR1LQ6DCA0 310 aa19.82■□□□□ 0.76
CTDNEP1-210ENST00000574322 C11orf68Q9H3H3 251 aaKnown RBP19.82■□□□□ 0.76
CTDNEP1-210ENST00000574322 TMEM101Q96IK0 257 aa19.82■□□□□ 0.76
CTDNEP1-210ENST00000574322 IGLV5-45A0A087WSX0 123 aa19.81■□□□□ 0.76
CTDNEP1-210ENST00000574322 A0A1B0GV90 55 aa19.81■□□□□ 0.76
CTDNEP1-210ENST00000574322 LEPROTO15243 131 aa19.81■□□□□ 0.76
CTDNEP1-210ENST00000574322 RETNQ9HD89 108 aa19.8■□□□□ 0.76
CTDNEP1-210ENST00000574322 FBN3Q75N90 2809 aa19.8■□□□□ 0.76
CTDNEP1-210ENST00000574322 TRAV26-1A0A087WT03 109 aa19.79■□□□□ 0.76
CTDNEP1-210ENST00000574322 SEC11AP67812 179 aa19.79■□□□□ 0.76
CTDNEP1-210ENST00000574322 ZNF815PA8K554 130 aa19.78■□□□□ 0.76
CTDNEP1-210ENST00000574322 J3QQQ9 107 aa19.78■□□□□ 0.76
CTDNEP1-210ENST00000574322 TSPEAR-AS2P59090 65 aa19.77■□□□□ 0.76
CTDNEP1-210ENST00000574322 TAL2Q16559 108 aa19.77■□□□□ 0.76
CTDNEP1-210ENST00000574322 PLEKHB2Q96CS7 222 aa19.77■□□□□ 0.76
CTDNEP1-210ENST00000574322 F5H768 121 aa19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 C12orf74Q32Q52 190 aa19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 CHCHD5Q9BSY4 110 aa19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 GEMIN7Q9H840 131 aaKnown RBP19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 GAGE6Q13070 117 aa19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 ORAOV1Q8WV07 137 aa19.76■□□□□ 0.75
CTDNEP1-210ENST00000574322 HERVK_113P63121 156 aa19.75■□□□□ 0.75
CTDNEP1-210ENST00000574322 LINC00242Q5T6M2 205 aa19.75■□□□□ 0.75
CTDNEP1-210ENST00000574322 A0A0J9YY99 117 aa19.74■□□□□ 0.75
CTDNEP1-210ENST00000574322 SH2D6Q7Z4S9 175 aa19.73■□□□□ 0.75
CTDNEP1-210ENST00000574322 IGHV1-58A0A0C4DH39 117 aa19.73■□□□□ 0.75
CTDNEP1-210ENST00000574322 LGALS3P17931 250 aaKnown RBP19.73■□□□□ 0.75
CTDNEP1-210ENST00000574322 LINC00469Q8N7U9 141 aa19.73■□□□□ 0.75
CTDNEP1-210ENST00000574322 A0A1B0GUV1 79 aa19.72■□□□□ 0.75
CTDNEP1-210ENST00000574322 MRPL23Q16540 153 aaKnown RBP19.72■□□□□ 0.75
CTDNEP1-210ENST00000574322 TM2D2Q9BX73 214 aa19.71■□□□□ 0.75
CTDNEP1-210ENST00000574322 H3BRM9 83 aa19.71■□□□□ 0.75
CTDNEP1-210ENST00000574322 IGHV3-30-3P0DP02 117 aa19.71■□□□□ 0.75
CTDNEP1-210ENST00000574322 CDKN2A-AS1Q9UH64 79 aa19.71■□□□□ 0.75
CTDNEP1-210ENST00000574322 COX6A2Q02221 97 aa19.7■□□□□ 0.74
CTDNEP1-210ENST00000574322 IGLV4-60A0A075B6I1 120 aa19.69■□□□□ 0.74
CTDNEP1-210ENST00000574322 TRAV13-1A0A0B4J241 112 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 H3BNG1 76 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 B9D2Q9BPU9 175 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 ICOSQ9Y6W8 199 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 HTN3P15516 51 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 CEND1Q8N111 149 aa19.68■□□□□ 0.74
CTDNEP1-210ENST00000574322 A0A096LPF7 62 aa19.67■□□□□ 0.74
CTDNEP1-210ENST00000574322 A6NDN8 102 aa19.67■□□□□ 0.74
CTDNEP1-210ENST00000574322 SCGB1D4Q6XE38 83 aa19.67■□□□□ 0.74
CTDNEP1-210ENST00000574322 TRAV8-3A0A0A6YYJ7 113 aa19.66■□□□□ 0.74
CTDNEP1-210ENST00000574322 IGHV3-64A0A075B6Q5 118 aa19.65■□□□□ 0.74
CTDNEP1-210ENST00000574322 TM2D3Q9BRN9 247 aa19.65■□□□□ 0.74
CTDNEP1-210ENST00000574322 IGLV5-39A0A0G2JS06 123 aa19.64■□□□□ 0.73
CTDNEP1-210ENST00000574322 SPINK8P0C7L1 97 aa19.64■□□□□ 0.73
CTDNEP1-210ENST00000574322 GCSHP23434 173 aa19.64■□□□□ 0.73
CTDNEP1-210ENST00000574322 HIST1H4GQ99525 98 aa19.64■□□□□ 0.73
CTDNEP1-210ENST00000574322 SPATA25Q9BR10 227 aa19.64■□□□□ 0.73
CTDNEP1-210ENST00000574322 PRKDCP78527 4128 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms