RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 HIVEP2P31629 2446 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 TRBV6-4A0A1B0GX49 114 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 VSIG2Q96IQ7 327 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 A0A0J9YXY3 114 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 F8W1H4 67 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 CUBNO60494 3623 aa11.61□□□□□ -0.55
POLR2A-201ENST00000572844 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
POLR2A-201ENST00000572844 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 CFC1P0CG37 223 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 INSL3P51460 131 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 TRGV2A0A075B6R0 118 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 TSPAN13O95857 204 aa11.59□□□□□ -0.55
POLR2A-201ENST00000572844 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
POLR2A-201ENST00000572844 OTOGQ6ZRI0 2925 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 TRAV8-3A0A0A6YYJ7 113 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 H7C423 109 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE7O76087 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 APOMO95445 188 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 HERVK_113P63121 156 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE4Q13068 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE5Q13069 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 ZFAND6Q6FIF0 208 aa11.58□□□□□ -0.56
POLR2A-201ENST00000572844 SETXQ7Z333 2677 aaKnown RBP11.57□□□□□ -0.56
POLR2A-201ENST00000572844 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
POLR2A-201ENST00000572844 LINC00694P0DN24 101 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 LITAFQ99732 161 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 SPANXDQ9BXN6 97 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 SPANXCQ9NY87 97 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 PRO1854Q9UHT4 67 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 A0A0B4J2C4 111 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 TIMM17BO60830 172 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 SPINK8P0C7L1 97 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 MUSTN1Q8IVN3 82 aa11.56□□□□□ -0.56
POLR2A-201ENST00000572844 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.55□□□□□ -0.56
POLR2A-201ENST00000572844 A4D1N5 150 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 LINC00242Q5T6M2 205 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 KIR2DL5BQ8NHK3 375 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 CDC42SE2Q9NRR3 84 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 SETD2Q9BYW2 2564 aaPredicted RBP11.55□□□□□ -0.56
POLR2A-201ENST00000572844 H3BMG7 143 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 FHL2Q14192 279 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
POLR2A-201ENST00000572844 TRGV4A0A0C4DH28 118 aa11.54□□□□□ -0.56
POLR2A-201ENST00000572844 INAFM1C9JVW0 142 aa11.54□□□□□ -0.56
POLR2A-201ENST00000572844 G3V4G9 280 aa11.54□□□□□ -0.56
POLR2A-201ENST00000572844 PRO0461Q9UI25 63 aa11.54□□□□□ -0.56
POLR2A-201ENST00000572844 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 SMIM9A6NGZ8 99 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 NDUFA1O15239 70 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 RNF183Q96D59 192 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 TMEM101Q96IK0 257 aa11.53□□□□□ -0.56
POLR2A-201ENST00000572844 COX6A2Q02221 97 aa11.52□□□□□ -0.57
POLR2A-201ENST00000572844 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.52□□□□□ -0.57
POLR2A-201ENST00000572844 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
POLR2A-201ENST00000572844 UBE2L6O14933 153 aa11.51□□□□□ -0.57
POLR2A-201ENST00000572844 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
POLR2A-201ENST00000572844 MIAQ16674 131 aa11.51□□□□□ -0.57
POLR2A-201ENST00000572844 LOC107984156A0A0G2JMH3 177 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 EIF4EBP3O60516 100 aaPredicted RBP11.5□□□□□ -0.57
POLR2A-201ENST00000572844 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 WFDC2Q14508 124 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 ARL17AQ8IVW1 177 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
POLR2A-201ENST00000572844 LOC100131303A0A0U1RQF7 123 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 CRLF1O75462 422 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 IFITM1P13164 125 aa11.5□□□□□ -0.57
POLR2A-201ENST00000572844 A8MZ25 164 aa11.49□□□□□ -0.57
POLR2A-201ENST00000572844 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
POLR2A-201ENST00000572844 NOTCH3Q9UM47 2321 aa11.49□□□□□ -0.57
POLR2A-201ENST00000572844 X6R8D5 127 aa11.49□□□□□ -0.57
POLR2A-201ENST00000572844 ERG28Q9UKR5 140 aa11.48□□□□□ -0.57
POLR2A-201ENST00000572844 SMIM1B2RUZ4 78 aa11.48□□□□□ -0.57
POLR2A-201ENST00000572844 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 PSMB2P49721 201 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 F5H768 121 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 CITED1Q99966 193 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
POLR2A-201ENST00000572844 PRSS2P07478 247 aa11.46□□□□□ -0.57
POLR2A-201ENST00000572844 CIRBPQ14011 172 aaKnown RBP11.46□□□□□ -0.57
POLR2A-201ENST00000572844 TCL1BO95988 128 aa11.45□□□□□ -0.58
POLR2A-201ENST00000572844 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 J3QR89 54 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 DEFB130BP0DP73 79 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms