RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NEXN-AS1Q8NBZ9 246 aa4.93□□□□□ -1.62
SMG1-217ENST00000569764 LINC00574Q9H8X3 128 aa4.93□□□□□ -1.62
SMG1-217ENST00000569764 PMS2P5A8MQ11 134 aa4.93□□□□□ -1.62
SMG1-217ENST00000569764 DEFB131AP59861 70 aa4.93□□□□□ -1.62
SMG1-217ENST00000569764 NANOS2P60321 138 aaKnown RBP4.93□□□□□ -1.62
SMG1-217ENST00000569764 DAND5Q8N907 189 aa4.93□□□□□ -1.62
SMG1-217ENST00000569764 NDUFA3O95167 84 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 IGKV1-16P04430 117 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 A0A096LNT2 108 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 E7EUB6 86 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 TTTY13Q9BZ97 58 aa4.92□□□□□ -1.62
SMG1-217ENST00000569764 TRBV7-6A0A0J9YX20 115 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 TRBV27A0A0K0K1C4 114 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 UBE2BP63146 152 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 IGHV7-4-1A0A0J9YVY3 117 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 G3V318 75 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 TRBV12-3P01733 135 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 PSMG4Q5JS54 123 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 TOMM6Q96B49 74 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 APCP25054 2843 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 IGHV7-81A0A0B4J1V7 117 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 ATOX1O00244 68 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 APELAP0DMC3 54 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 HTN1P15515 57 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 SLURP1P55000 103 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 C14orf177Q52M58 125 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 C10orf113Q5VZT2 155 aa4.91□□□□□ -1.62
SMG1-217ENST00000569764 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.9□□□□□ -1.62
SMG1-217ENST00000569764 C2orf70A6NJV1 201 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 KRTAP1-1Q07627 177 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 IGHV4OR15-8A0A075B7B6 117 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 A0A087WW49 117 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 CDK2AP2O75956 126 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.62
SMG1-217ENST00000569764 F2Z2F3 143 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 F8W735 103 aaPredicted RBP4.9□□□□□ -1.63
SMG1-217ENST00000569764 MRGPRG-AS1Q2M3A8 158 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 TEX15Q9BXT5 2789 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 CRPP02741 224 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 FRMD6-AS1P0C7T7 363 aa4.9□□□□□ -1.63
SMG1-217ENST00000569764 NXPH4O95158 308 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 APCSP02743 223 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 CHCHD10Q8WYQ3 142 aaPredicted RBP4.89□□□□□ -1.63
SMG1-217ENST00000569764 HLA-DMBP28068 263 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 OSTCQ9NRP0 149 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
SMG1-217ENST00000569764 NF1P21359 2839 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 IGHV3OR16-13A0A075B7E8 117 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 SPINK4O60575 86 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 DEFB136Q30KP8 78 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 UBE2L5PA0A1B0GUS4 154 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 IGHV4-30-4P0DP06 118 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 ZNF876PQ49A33 203 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 IL36BQ9NZH7 164 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 TP53TG3Q9ULZ0 132 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
SMG1-217ENST00000569764 ATRQ13535 2644 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 CKS2P33552 79 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 ZNF138P52744 262 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 C2orf83Q53S99 150 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 CLEC2BQ92478 149 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.63
SMG1-217ENST00000569764 CRIP2P52943 208 aaPredicted RBP4.87□□□□□ -1.63
SMG1-217ENST00000569764 C10orf55Q5SWW7 151 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
SMG1-217ENST00000569764 IGLV1-51P01701 117 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 CFAP126Q5VTH2 177 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 FP248Q71RG6 208 aaPredicted RBP4.86□□□□□ -1.63
SMG1-217ENST00000569764 KMT2BQ9UMN6 2715 aaPredicted RBP4.86□□□□□ -1.63
SMG1-217ENST00000569764 IGKV1OR2-108A0A075B7D4 117 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 HBDP02042 147 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 C2orf91Q6ZV80 131 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 HIST1H4GQ99525 98 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 ITPR3Q14573 2671 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 IGHV3-35A0A0C4DH35 117 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 IGLV2-23P01705 113 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 C16orf74Q96GX8 76 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 IGHV3-48P01763 117 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
SMG1-217ENST00000569764 TRGV9Q99603 122 aa4.86□□□□□ -1.63
SMG1-217ENST00000569764 SORL1Q92673 2214 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 IGHV3-21A0A0B4J1V1 117 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 LINC00310P59036 64 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 DEFB135Q30KP9 77 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 MRPL36Q9P0J6 103 aaKnown RBP4.85□□□□□ -1.63
SMG1-217ENST00000569764 C11orf21Q9P2W6 132 aa4.85□□□□□ -1.63
SMG1-217ENST00000569764 ICOSQ9Y6W8 199 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms