RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 TSKUQ8WUA8 353 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 HIST1H2BAQ96A08 127 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 MANBALQ9NQG1 85 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 SMCO4Q9NRQ5 59 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 LINC00846Q9NV44 126 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 A0A087WZ39 114 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 FABP5P3A8MUU1 101 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 B4DEV8 164 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 M0R036 132 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 RHODO00212 210 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 TRIAP1O43715 76 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 GCGP01275 180 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 S100A9P06702 114 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 RNASE3P12724 160 aaKnown RBP3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 PCP4P48539 62 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 PNRC1Q12796 327 aaPredicted RBP3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 FAM74A3Q4VXF1 159 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 SMUG1Q53HV7 270 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 KRTAP11-1Q8IUC1 163 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 LINC00304Q8N9R0 145 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 C20orf203Q8NBC4 194 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 OR10G8Q8NGN5 311 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 FMC1Q96HJ9 113 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 ZFP30Q9Y2G7 519 aa3.73□□□□□ -1.81
HERPUD1-217ENST00000569429 GAGE10A6NGK3 116 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 TMEM250H0YL14 139 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 PDE6DO43924 150 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 BCL2P10415 239 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 ADCYAP1P18509 176 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 S100A4P26447 101 aaKnown RBP3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 MEF2BQ02080 365 aaPredicted RBP3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 GAGE2BQ13066 116 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 TVP23CQ96ET8 276 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 CARD19Q96LW7 228 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 TCEAL7Q9BRU2 100 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 JPT2Q9H910 190 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 RPS10P5Q9NQ39 176 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 ARL2-SNX15V9GYD0 113 aa3.72□□□□□ -1.81
HERPUD1-217ENST00000569429 KMT2DO14686 5537 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 TMSB15BA0A087X1C1 80 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 LOC107984640A0A0U1RRK4 108 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 C7orf77A4D0Y5 90 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 MT-ND4LP03901 98 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 SRP19P09132 144 aaKnown RBP3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 FGF6P10767 208 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 RPL35P42766 123 aaKnown RBP3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 GNG4P50150 75 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 ZNF80P51504 273 aaPredicted RBP3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 SSTP61278 116 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 GAGE6Q13070 117 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 TMEM97Q5BJF2 176 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 NTM-AS1Q6ZSK4 140 aa3.71□□□□□ -1.82
HERPUD1-217ENST00000569429 A0A1B0GUV1 79 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 GRIFINA4D1Z8 144 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 GAGE12HA6NDE8 117 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 ZNF727A8MUV8 499 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 C9JQL5 133 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 SH2D1AO60880 128 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 RAB5BP61020 215 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 CENPWQ5EE01 88 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 Q86TA4 180 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 BTF3L4Q96K17 158 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 DERL1Q9BUN8 251 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 TMEM242Q9NWH2 141 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 C11orf21Q9P2W6 132 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 PHLDA3Q9Y5J5 127 aa3.7□□□□□ -1.82
HERPUD1-217ENST00000569429 C1orf196B1AJZ1 125 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 ZNF861PO60384 105 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 LTAP01374 205 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 TMEM241Q24JQ0 296 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 XP32Q5T750 250 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 CBLN2Q8IUK8 224 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 OCC1Q8TAD7 63 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 SMIM7Q9BQ49 75 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 TPPP3Q9BW30 176 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 BIN3Q9NQY0 253 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 NAT8Q9UHE5 227 aa3.69□□□□□ -1.82
HERPUD1-217ENST00000569429 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 TRBV25-1A0A075B6N4 114 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 TRBV6-1A0A0K0K1D8 114 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 LOC105371267A0A1B0GV96 52 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 COLCA2A8K830 154 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 PPP1R2P9O14990 202 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 S100A6P06703 90 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 S100PP25815 95 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 CRIP1P50238 77 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 IQCJQ1A5X6 159 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 KRTAP13-2Q52LG2 175 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 FAM74A4Q5TZK3 123 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 NEXN-AS1Q8NBZ9 246 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 OR2D3Q8NGH3 330 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 C11orf52Q96A22 123 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
HERPUD1-217ENST00000569429 IGKV3D-20A0A0C4DH25 116 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 MUC21A0A140T8X8 626 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms