RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
HERC2-208ENST00000566635 ZC2HC1BQ5TFG8 222 aa12.32□□□□□ -0.44
HERC2-208ENST00000566635 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
HERC2-208ENST00000566635 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
HERC2-208ENST00000566635 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
HERC2-208ENST00000566635 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
HERC2-208ENST00000566635 ODF1Q14990 250 aa12.31□□□□□ -0.44
HERC2-208ENST00000566635 LGALS9CQ6DKI2 356 aa12.31□□□□□ -0.44
HERC2-208ENST00000566635 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
HERC2-208ENST00000566635 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
HERC2-208ENST00000566635 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
HERC2-208ENST00000566635 Q6ZVH6 145 aa12.3□□□□□ -0.44
HERC2-208ENST00000566635 FAM104AQ969W3 186 aa12.29□□□□□ -0.44
HERC2-208ENST00000566635 IGLV4-3A0A075B6K6 122 aa12.29□□□□□ -0.44
HERC2-208ENST00000566635 TRBV25-1A0A075B6N4 114 aa12.29□□□□□ -0.44
HERC2-208ENST00000566635 TRBV6-8A0A0A6YYG3 113 aa12.29□□□□□ -0.44
HERC2-208ENST00000566635 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
HERC2-208ENST00000566635 A0A087WX48 190 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 DEFB131BA0A096LNP1 70 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 TRAV12-1A0A0B4J245 112 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 RNASE13Q5GAN3 156 aaKnown RBP12.28□□□□□ -0.44
HERC2-208ENST00000566635 MRPL35Q9NZE8 188 aaKnown RBP12.28□□□□□ -0.44
HERC2-208ENST00000566635 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 STAB2Q8WWQ8 2551 aa12.28□□□□□ -0.44
HERC2-208ENST00000566635 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.45
HERC2-208ENST00000566635 Q6ZUT4 128 aa12.27□□□□□ -0.45
HERC2-208ENST00000566635 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
HERC2-208ENST00000566635 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
HERC2-208ENST00000566635 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 TAX1BP3O14907 124 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 UBE2L6O14933 153 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 FGF6P10767 208 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 PMVKQ15126 192 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 OCIAD2Q56VL3 154 aa12.26□□□□□ -0.45
HERC2-208ENST00000566635 GAGE6Q13070 117 aa12.25□□□□□ -0.45
HERC2-208ENST00000566635 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
HERC2-208ENST00000566635 VAMP3Q15836 100 aa12.25□□□□□ -0.45
HERC2-208ENST00000566635 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
HERC2-208ENST00000566635 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
HERC2-208ENST00000566635 F8VRH5 84 aa12.24□□□□□ -0.45
HERC2-208ENST00000566635 RNF151Q2KHN1 245 aa12.23□□□□□ -0.45
HERC2-208ENST00000566635 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
HERC2-208ENST00000566635 DPM2O94777 84 aa12.23□□□□□ -0.45
HERC2-208ENST00000566635 IGKCP01834 107 aa12.23□□□□□ -0.45
HERC2-208ENST00000566635 VCX2Q9H322 139 aa12.23□□□□□ -0.45
HERC2-208ENST00000566635 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 H3BNG1 76 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 AMELXQ99217 191 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 MPV17L2Q567V2 206 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 AMMECR1LQ6DCA0 310 aa12.22□□□□□ -0.45
HERC2-208ENST00000566635 VPS25Q9BRG1 176 aa12.21□□□□□ -0.45
HERC2-208ENST00000566635 H7C423 109 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 TCTAP57738 103 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 MRPS36P82909 103 aaKnown RBP12.2□□□□□ -0.46
HERC2-208ENST00000566635 PLNP26678 52 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 PAPPA-AS1Q5QFB9 102 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 SH2D6Q7Z4S9 175 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 OR5A1Q8NGJ0 315 aa12.2□□□□□ -0.46
HERC2-208ENST00000566635 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
HERC2-208ENST00000566635 NHLRC4P0CG21 123 aaPredicted RBP12.19□□□□□ -0.46
HERC2-208ENST00000566635 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
HERC2-208ENST00000566635 K7ERU9 68 aa12.19□□□□□ -0.46
HERC2-208ENST00000566635 SLC25A34Q6PIV7 304 aa12.19□□□□□ -0.46
HERC2-208ENST00000566635 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
HERC2-208ENST00000566635 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
HERC2-208ENST00000566635 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
HERC2-208ENST00000566635 TMEM101Q96IK0 257 aa12.18□□□□□ -0.46
HERC2-208ENST00000566635 CDC42SE2Q9NRR3 84 aa12.18□□□□□ -0.46
HERC2-208ENST00000566635 SMAGPQ0VAQ4 97 aa12.17□□□□□ -0.46
HERC2-208ENST00000566635 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
HERC2-208ENST00000566635 TMEM262E9PQX1 116 aa12.17□□□□□ -0.46
HERC2-208ENST00000566635 LELP1Q5T871 98 aa12.17□□□□□ -0.46
HERC2-208ENST00000566635 Q8N3U1 123 aa12.17□□□□□ -0.46
HERC2-208ENST00000566635 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
HERC2-208ENST00000566635 UBE2D1P51668 147 aa12.14□□□□□ -0.47
HERC2-208ENST00000566635 TP73-AS1Q9UF72 201 aa12.14□□□□□ -0.47
HERC2-208ENST00000566635 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
HERC2-208ENST00000566635 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
HERC2-208ENST00000566635 ESRGQ1W209 222 aa12.13□□□□□ -0.47
HERC2-208ENST00000566635 DYNC2H1Q8NCM8 4307 aaKnown RBP12.13□□□□□ -0.47
HERC2-208ENST00000566635 TRAV13-1A0A0B4J241 112 aa12.13□□□□□ -0.47
HERC2-208ENST00000566635 TIRAPP58753 221 aa12.13□□□□□ -0.47
HERC2-208ENST00000566635 IGKV3OR2-268A0A0C4DH90 116 aa12.12□□□□□ -0.47
HERC2-208ENST00000566635 IGLL5B9A064 214 aa12.12□□□□□ -0.47
HERC2-208ENST00000566635 TMEM238C9JI98 176 aa12.12□□□□□ -0.47
HERC2-208ENST00000566635 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 DNAH7Q8WXX0 4024 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
HERC2-208ENST00000566635 SEC11AP67812 179 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
HERC2-208ENST00000566635 CLPSL2Q6UWE3 100 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms