RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
LINC00554-201ENST00000564841 B4DSR2 109 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 MIAQ16674 131 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 NSUN5P1Q3KNT7 163 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 HIST2H2BDQ6DRA6 164 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 Q8N2B8 174 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 MOB4Q9Y3A3 225 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 C10orf99Q6UWK7 81 aa11.93□□□□□ -0.5
LINC00554-201ENST00000564841 A0A0J9YX75 114 aa11.92□□□□□ -0.5
LINC00554-201ENST00000564841 TRBV7-1A0A0A6YYK4 115 aa11.92□□□□□ -0.5
LINC00554-201ENST00000564841 hADV29S1A0JD25 119 aa11.92□□□□□ -0.5
LINC00554-201ENST00000564841 SMIM9A6NGZ8 99 aa11.92□□□□□ -0.5
LINC00554-201ENST00000564841 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
LINC00554-201ENST00000564841 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
LINC00554-201ENST00000564841 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
LINC00554-201ENST00000564841 DAZ1Q9NQZ3 744 aaKnown RBP11.92□□□□□ -0.5
LINC00554-201ENST00000564841 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
LINC00554-201ENST00000564841 HTN1P15515 57 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 KIR2DL5BQ8NHK3 375 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 SPANXA1Q9NS26 97 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 UQCRQO14949 82 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 PRM2P04554 102 aa11.91□□□□□ -0.5
LINC00554-201ENST00000564841 IGHV1-58A0A0C4DH39 117 aa11.9□□□□□ -0.5
LINC00554-201ENST00000564841 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
LINC00554-201ENST00000564841 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
LINC00554-201ENST00000564841 GCN1Q92616 2671 aaKnown RBP11.9□□□□□ -0.51
LINC00554-201ENST00000564841 NIPBLQ6KC79 2804 aaeCLIP11.9□□□□□ -0.51
LINC00554-201ENST00000564841 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 IGHG2P01859 326 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 VSIG2Q96IQ7 327 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 SPANXDQ9BXN6 97 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 SPANXCQ9NY87 97 aa11.89□□□□□ -0.51
LINC00554-201ENST00000564841 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
LINC00554-201ENST00000564841 KNCNA6PVL3 124 aa11.88□□□□□ -0.51
LINC00554-201ENST00000564841 KLLNB2CW77 178 aa11.88□□□□□ -0.51
LINC00554-201ENST00000564841 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
LINC00554-201ENST00000564841 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 GAGE2AQ6NT46 116 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 APRG1Q8IVJ8 170 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 Q9HAA7 133 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
LINC00554-201ENST00000564841 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
LINC00554-201ENST00000564841 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
LINC00554-201ENST00000564841 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 LINC00643Q86TS7 51 aa11.87□□□□□ -0.51
LINC00554-201ENST00000564841 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
LINC00554-201ENST00000564841 C2orf48Q96LS8 159 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 C22orf24Q9Y442 160 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 TIRAPP58753 221 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
LINC00554-201ENST00000564841 J3KT08 172 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 LINC01356Q8N9X3 169 aa11.86□□□□□ -0.51
LINC00554-201ENST00000564841 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 Q96MF0 132 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 IGHV3-38A0A0C4DH36 116 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 COX7CP15954 63 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
LINC00554-201ENST00000564841 A0A087WVE0 104 aa11.84□□□□□ -0.51
LINC00554-201ENST00000564841 IGKV3D-7A0A0C4DH55 119 aa11.84□□□□□ -0.51
LINC00554-201ENST00000564841 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
LINC00554-201ENST00000564841 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
LINC00554-201ENST00000564841 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
LINC00554-201ENST00000564841 A6NDX4 124 aa11.83□□□□□ -0.52
LINC00554-201ENST00000564841 OXTP01178 125 aa11.83□□□□□ -0.52
LINC00554-201ENST00000564841 DSCR8Q96T75 97 aa11.83□□□□□ -0.52
LINC00554-201ENST00000564841 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 COX7A2LO14548 114 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 ACYP1P07311 99 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 C5orf38Q86SI9 138 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 DSCR9P59020 149 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 COX6A2Q02221 97 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 Q9H8V8 135 aa11.81□□□□□ -0.52
LINC00554-201ENST00000564841 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 NDUFA4O00483 81 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 DEFB113Q30KQ7 82 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 Q6ZSN1 163 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 LRRC75A-AS1Q8N1F1 130 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 C4orf26Q17RF5 130 aa11.8□□□□□ -0.52
LINC00554-201ENST00000564841 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
LINC00554-201ENST00000564841 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
LINC00554-201ENST00000564841 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
LINC00554-201ENST00000564841 WFDC11Q8NEX6 87 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 CR1P17927 2039 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 FAM223BA6NKX1 122 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 IGHV4-31P0DP07 118 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 FAM223AQ8IWN6 122 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 A0A1B0GX51 115 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 LINC00467Q9BRT7 94 aa11.78□□□□□ -0.52
LINC00554-201ENST00000564841 A0A096LNT2 108 aa11.77□□□□□ -0.53
LINC00554-201ENST00000564841 RNF152Q8N8N0 203 aa11.77□□□□□ -0.53
LINC00554-201ENST00000564841 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms