RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PRADC1Q9BSG0 188 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 CHCHD7Q9BUK0 85 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TTTY13Q9BZ97 58 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 VCX2Q9H322 139 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 RETNQ9HD89 108 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 COX11Q9Y6N1 276 aa5.3□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TRBV7-3A0A075B6L6 115 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TRBV25-1A0A075B6N4 114 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 IGHV3-38A0A0C4DH36 116 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 MYMXA0A1B0GTQ4 84 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 NHLRC4P0CG21 123 aaPredicted RBP5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 EMP1P54849 157 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TAL2Q16559 108 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TMEM170BQ5T4T1 132 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 LINC00469Q8N7U9 141 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 ZNRF2Q8NHG8 242 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 PHLDA1Q8WV24 401 aaPredicted RBP5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
MAP1LC3B-205ENST00000564638 DNAH7Q8WXX0 4024 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TRGV4A0A0C4DH28 118 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 SMIM9A6NGZ8 99 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 ZNF815PA8K554 130 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 GCSHP23434 173 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 APOC4P55056 127 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 UBE2D3P61077 147 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 UBE2D2P62837 147 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 GAGE1Q13065 139 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 DAZ4Q86SG3 579 aaKnown RBP5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 AMELXQ99217 191 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 OPRPNQ99935 248 aaPredicted RBP5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 SPATA25Q9BR10 227 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 TIMM21Q9BVV7 248 aa5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 DAZ3Q9NR90 486 aaKnown RBP5.28□□□□□ -1.56
MAP1LC3B-205ENST00000564638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 A0A0J9YXV3 536 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TRBV6-4A0A1B0GX49 114 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 IGKV2-29A2NJV5 120 aaPredicted RBP5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GAGE12JA6NER3 117 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TAX1BP3O14907 124 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LGALS3P17931 250 aaKnown RBP5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GAGE4Q13068 117 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GAGE5Q13069 117 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 DEFB135Q30KP9 77 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 MAPKAPK5-AS1Q8N8E1 139 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 SLC25A29Q8N8R3 303 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 KIR2DL5BQ8NHK3 375 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 PLEKHB2Q96CS7 222 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TM2D3Q9BRN9 247 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 Q9UF83 564 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
MAP1LC3B-205ENST00000564638 STAB2Q8WWQ8 2551 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TMEM223A0PJW6 202 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 H3BRM9 83 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LEPROTO15243 131 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 MRPS36P82909 103 aaKnown RBP5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 VAMP3Q15836 100 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 Q6ZUT4 128 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 CEND1Q8N111 149 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 HIST1H4GQ99525 98 aa5.26□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LYRM9A8MSI8 78 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 J3QQQ9 107 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 UBE2L6O14933 153 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TNP2Q05952 138 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 CEMP1Q6PRD7 247 aaPredicted RBP5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 Q6ZVH6 145 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LINC00612Q8N6U2 182 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TMEM243Q9BU79 118 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TM2D2Q9BX73 214 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GTSF1LQ9H1H1 148 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 X6R8D5 127 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 H7C423 109 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 SMIM13P0DJ93 91 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 DEFB130BP0DP73 79 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 DEFB130AP0DP74 79 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 FXYD2P54710 66 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TSPEAR-AS2P59090 65 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 FHL2Q14192 279 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 RNASE13Q5GAN3 156 aaKnown RBP5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 OR5A1Q8NGJ0 315 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 FAM104AQ969W3 186 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TMEM101Q96IK0 257 aa5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 CSDC2Q9Y534 153 aaKnown RBP5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 PLECQ15149 4684 aaKnown RBP5.24□□□□□ -1.57
MAP1LC3B-205ENST00000564638 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
MAP1LC3B-205ENST00000564638 LINC00694P0DN24 101 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms