RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 KRTAP1-1Q07627 177 aa14.35□□□□□ -0.11
MSLN-205ENST00000563941 DGAT2L7PQ6IED9 249 aa14.35□□□□□ -0.11
MSLN-205ENST00000563941 LINC01006Q8NI28 216 aa14.35□□□□□ -0.11
MSLN-205ENST00000563941 H7C2G1 150 aa14.34□□□□□ -0.11
MSLN-205ENST00000563941 K7EQD1 137 aa14.33□□□□□ -0.11
MSLN-205ENST00000563941 ADAMTSL4-AS1Q5T5F5 129 aa14.33□□□□□ -0.11
MSLN-205ENST00000563941 FOXI1Q12951 378 aa14.33□□□□□ -0.12
MSLN-205ENST00000563941 SPANXDQ9BXN6 97 aa14.33□□□□□ -0.12
MSLN-205ENST00000563941 YAE1D1Q9NRH1 226 aa14.33□□□□□ -0.12
MSLN-205ENST00000563941 SPANXCQ9NY87 97 aa14.33□□□□□ -0.12
MSLN-205ENST00000563941 CDKN2A-AS1Q9UH64 79 aa14.33□□□□□ -0.12
MSLN-205ENST00000563941 PRSS2P07478 247 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 TIRAPP58753 221 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 RPL36AP83881 106 aaKnown RBP14.32□□□□□ -0.12
MSLN-205ENST00000563941 ZFAND6Q6FIF0 208 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 RPL36ALQ969Q0 106 aaKnown RBP14.32□□□□□ -0.12
MSLN-205ENST00000563941 UNC79Q9P2D8 2635 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 IGLV5-45A0A087WSX0 123 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 TRAV4A0A0B4J268 109 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 SPATA25Q9BR10 227 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 C16orf95Q9H693 158 aa14.32□□□□□ -0.12
MSLN-205ENST00000563941 NF1P21359 2839 aa14.31□□□□□ -0.12
MSLN-205ENST00000563941 RNASE1P07998 156 aaKnown RBP14.31□□□□□ -0.12
MSLN-205ENST00000563941 LINC00694P0DN24 101 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 MIAQ16674 131 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 SBSPONQ8IVN8 264 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 SIGMAR1Q99720 223 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 GTSF1LQ9H1H1 148 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 CUBNO60494 3623 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 GIG44P09565 113 aaPredicted RBP14.3□□□□□ -0.12
MSLN-205ENST00000563941 CMC4P56277 68 aaPredicted RBP14.3□□□□□ -0.12
MSLN-205ENST00000563941 Q1RN00 199 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.3□□□□□ -0.12
MSLN-205ENST00000563941 WFDC10AQ9H1F0 79 aa14.3□□□□□ -0.12
MSLN-205ENST00000563941 NOP10Q9NPE3 64 aaKnown RBP14.3□□□□□ -0.12
MSLN-205ENST00000563941 COX6A2Q02221 97 aa14.29□□□□□ -0.12
MSLN-205ENST00000563941 DAZ2Q13117 558 aaKnown RBP14.29□□□□□ -0.12
MSLN-205ENST00000563941 NTM-AS1Q6ZSK4 140 aa14.29□□□□□ -0.12
MSLN-205ENST00000563941 DAZ4Q86SG3 579 aaKnown RBP14.29□□□□□ -0.12
MSLN-205ENST00000563941 TMEM101Q96IK0 257 aa14.29□□□□□ -0.12
MSLN-205ENST00000563941 DAZ3Q9NR90 486 aaKnown RBP14.29□□□□□ -0.12
MSLN-205ENST00000563941 TEN1Q86WV5 123 aa14.28□□□□□ -0.12
MSLN-205ENST00000563941 GAGE12JA6NER3 117 aa14.27□□□□□ -0.13
MSLN-205ENST00000563941 HERVK_113P63121 156 aa14.27□□□□□ -0.13
MSLN-205ENST00000563941 GAGE4Q13068 117 aa14.27□□□□□ -0.13
MSLN-205ENST00000563941 GAGE5Q13069 117 aa14.27□□□□□ -0.13
MSLN-205ENST00000563941 LINC00242Q5T6M2 205 aa14.27□□□□□ -0.13
MSLN-205ENST00000563941 IGLV1-51P01701 117 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 NPC2P61916 151 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 GCN1Q92616 2671 aaKnown RBP14.26□□□□□ -0.13
MSLN-205ENST00000563941 NDUFA1O15239 70 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 TIMM17BO60830 172 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 RPL35AP18077 110 aaKnown RBP14.26□□□□□ -0.13
MSLN-205ENST00000563941 PPDPFLQ8WWR9 84 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 C16orf74Q96GX8 76 aa14.26□□□□□ -0.13
MSLN-205ENST00000563941 CSDC2Q9Y534 153 aaKnown RBP14.26□□□□□ -0.13
MSLN-205ENST00000563941 PLAC8L1A1L4L8 177 aa14.25□□□□□ -0.13
MSLN-205ENST00000563941 CARD19Q96LW7 228 aa14.25□□□□□ -0.13
MSLN-205ENST00000563941 C19orf73Q9NVV2 129 aa14.25□□□□□ -0.13
MSLN-205ENST00000563941 ACANP16112 2415 aa14.25□□□□□ -0.13
MSLN-205ENST00000563941 NDUFA7O95182 113 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 FAM19A3Q7Z5A8 133 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 FAM110AQ9BQ89 295 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 TRBV30A0A0K0K1B3 111 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 C9JAW5 83 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 ANKRD29Q8N6D5 301 aa14.24□□□□□ -0.13
MSLN-205ENST00000563941 IGLV5-39A0A0G2JS06 123 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 TRIAP1O43715 76 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 SLC25A20O43772 301 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 SMAGPQ0VAQ4 97 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 GAGE7O76087 117 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 GAGE12FP0CL80 117 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 GAGE12GP0CL81 117 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 GAGE12IP0CL82 117 aa14.23□□□□□ -0.13
MSLN-205ENST00000563941 TRGV2A0A075B6R0 118 aa14.22□□□□□ -0.13
MSLN-205ENST00000563941 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
MSLN-205ENST00000563941 ATXN8Q156A1 80 aa14.22□□□□□ -0.13
MSLN-205ENST00000563941 DAND5Q8N907 189 aa14.21□□□□□ -0.13
MSLN-205ENST00000563941 RNF183Q96D59 192 aa14.21□□□□□ -0.13
MSLN-205ENST00000563941 CDC42SE2Q9NRR3 84 aa14.21□□□□□ -0.13
MSLN-205ENST00000563941 IFITM1P13164 125 aa14.21□□□□□ -0.13
MSLN-205ENST00000563941 SETXQ7Z333 2677 aaKnown RBP14.21□□□□□ -0.14
MSLN-205ENST00000563941 SMIM1B2RUZ4 78 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 CSNK1G2-AS1Q8NCQ2 148 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 Q9H8V8 135 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 ICOSQ9Y6W8 199 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 M0QXV9 152 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 SCGB1A1P11684 91 aa14.2□□□□□ -0.14
MSLN-205ENST00000563941 CIRBPQ14011 172 aaKnown RBP14.19□□□□□ -0.14
MSLN-205ENST00000563941 TMEM243Q9BU79 118 aa14.19□□□□□ -0.14
MSLN-205ENST00000563941 ANK3Q12955 4377 aaKnown RBP14.19□□□□□ -0.14
MSLN-205ENST00000563941 SETD2Q9BYW2 2564 aaPredicted RBP14.19□□□□□ -0.14
MSLN-205ENST00000563941 LOC100131303A0A0U1RQF7 123 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 UBE2L6O14933 153 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 HILS1P60008 231 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 LINC01620Q4KN68 170 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 CDIP1Q9H305 208 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 OVOL2Q9BRP0 275 aa14.18□□□□□ -0.14
MSLN-205ENST00000563941 TRBV6-4A0A1B0GX49 114 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms