RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HIST1H2BAQ96A08 127 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 FMC1Q96HJ9 113 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 PACRGQ96M98 296 aaPredicted RBP2.95□□□□□ -1.94
LINC00254-201ENST00000563416 TCEAL7Q9BRU2 100 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 CHCHD7Q9BUK0 85 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 NKX6-2Q9C056 277 aaPredicted RBP2.95□□□□□ -1.94
LINC00254-201ENST00000563416 C8orf17Q9NRJ1 99 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 TRAV1-1A0A0B4J248 108 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 TRAV21A0A0B4J279 112 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 TRBV6-1A0A0K0K1D8 114 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 A0A1B0GVG6 124 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 TINCRA0A1B0GVN0 87 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 C9JQL5 133 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 F6UZH7 168 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 SPINK4O60575 86 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 ATP5G1P05496 136 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 DEFB130BP0DP73 79 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 DEFB130AP0DP74 79 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 HTN1P15515 57 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 ATP5G3P48201 142 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 SULT1A2P50226 295 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 RAB5CP51148 216 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 ZNF80P51504 273 aaPredicted RBP2.94□□□□□ -1.94
LINC00254-201ENST00000563416 NKX2-5P52952 324 aaPredicted RBP2.94□□□□□ -1.94
LINC00254-201ENST00000563416 LGALS9BQ3B8N2 356 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 EIF5AL1Q6IS14 154 aaKnown RBP2.94□□□□□ -1.94
LINC00254-201ENST00000563416 Q6ZTI0 123 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 Q86TA4 180 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 FAM213BQ8TBF2 198 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 NDFIP1Q9BT67 221 aa2.94□□□□□ -1.94
LINC00254-201ENST00000563416 NOP10Q9NPE3 64 aaKnown RBP2.94□□□□□ -1.94
LINC00254-201ENST00000563416 DNAH5Q8TE73 4624 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 H3BNG1 76 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 SCO1O75880 301 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 LY6G6CO95867 125 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 IFNA7P01567 189 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 TYMSP04818 313 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 PFN1P07737 140 aaKnown RBP2.93□□□□□ -1.94
LINC00254-201ENST00000563416 P0DMU3 169 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 FAM231AP0DMU4 169 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 FAM231CP0DMU5 169 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 HTN3P15516 51 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 RPS10P46783 165 aaKnown RBP2.93□□□□□ -1.94
LINC00254-201ENST00000563416 SYCNQ0VAF6 134 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 RNASE13Q5GAN3 156 aaKnown RBP2.93□□□□□ -1.94
LINC00254-201ENST00000563416 NTM-AS1Q6ZSK4 140 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
LINC00254-201ENST00000563416 PRNTQ86SH4 94 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 C15orf53Q8NAA6 179 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 SFT2D1Q8WV19 159 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 PTH2Q96A98 100 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 YPEL4Q96NS1 127 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 MANBALQ9NQG1 85 aa2.93□□□□□ -1.94
LINC00254-201ENST00000563416 TRGV1A0A0A0MS02 117 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 TRAV8-3A0A0A6YYJ7 113 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 LTAP01374 205 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 HLA-DQA1P01909 254 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 RNASE3P12724 160 aaKnown RBP2.92□□□□□ -1.94
LINC00254-201ENST00000563416 UBE2G1P62253 170 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 CCL20P78556 96 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 DNLZQ5SXM8 178 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 ZC2HC1AQ96GY0 325 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 TXNDC17Q9BRA2 123 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 MRPL16Q9NX20 251 aaKnown RBP2.92□□□□□ -1.94
LINC00254-201ENST00000563416 ZFP30Q9Y2G7 519 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
LINC00254-201ENST00000563416 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.91□□□□□ -1.94
LINC00254-201ENST00000563416 TRGV2A0A075B6R0 118 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 IGKV2D-24A0A075B6R9 120 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 A0A096LNJ9 63 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 TRAV4A0A0B4J268 109 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 A0A1B0GV50 99 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 M0R2P5 195 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 GNRH2O43555 120 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 SH2D1AO60880 128 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 CXCL1P09341 107 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 AKR1C3P42330 323 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 CRIP1P50238 77 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 MEF2BQ02080 365 aaPredicted RBP2.91□□□□□ -1.94
LINC00254-201ENST00000563416 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 GATD1Q8NB37 220 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 ANAPC13Q9BS18 74 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 IL36BQ9NZH7 164 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 RBM12B-AS1Q9P1G2 102 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 GNG13Q9P2W3 67 aa2.91□□□□□ -1.94
LINC00254-201ENST00000563416 IGKV2-28A0A075B6P5 120 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 A0A096LPF7 62 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 PDE6DO43924 150 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 IFNA1P01562 189 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 IGKV2D-28P01615 120 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 BCL2P10415 239 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 RPL35P42766 123 aaKnown RBP2.9□□□□□ -1.95
LINC00254-201ENST00000563416 CRYBA4P53673 196 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 LINC00315P59091 139 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 ALKAL2Q6UX46 152 aa2.9□□□□□ -1.95
LINC00254-201ENST00000563416 ZNRF2Q8NHG8 242 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms