RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 C19orf84I3L1E1 186 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 LINC01547P58512 204 aaPredicted RBP6.57□□□□□ -1.36
CDH1-205ENST00000562836 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 MAP6D1Q9H9H5 199 aa6.57□□□□□ -1.36
CDH1-205ENST00000562836 VPS13AQ96RL7 3174 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 A0A087WYN8 130 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 F5H697 171 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 PROP1O75360 226 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 C3orf84H3BNL1 204 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 FSHBP01225 129 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 SMAD5-AS1Q9Y6J3 95 aa6.56□□□□□ -1.36
CDH1-205ENST00000562836 PTPRQQ9UMZ3 2332 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 ASXL3Q9C0F0 2248 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 BPY2O14599 106 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 PRR4Q16378 134 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 MRPL36Q9P0J6 103 aaKnown RBP6.55□□□□□ -1.36
CDH1-205ENST00000562836 DMDP11532 3685 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 PATE4P0C8F1 98 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
CDH1-205ENST00000562836 SLPIP03973 132 aa6.54□□□□□ -1.36
CDH1-205ENST00000562836 RPL39P5Q59GN2 51 aa6.54□□□□□ -1.36
CDH1-205ENST00000562836 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 HIGD2BQ4VC39 106 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 CHCHD10Q8WYQ3 142 aaPredicted RBP6.53□□□□□ -1.36
CDH1-205ENST00000562836 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 DEFB119Q8N690 84 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 Q8TAT8 98 aa6.53□□□□□ -1.36
CDH1-205ENST00000562836 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 ZNHIT1O43257 154 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 CCL3P10147 92 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 WDFY4Q6ZS81 3184 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 IGKV3D-20A0A0C4DH25 116 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 Q8N9P0 234 aaPredicted RBP6.52□□□□□ -1.37
CDH1-205ENST00000562836 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
CDH1-205ENST00000562836 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
CDH1-205ENST00000562836 GNLYP22749 145 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
CDH1-205ENST00000562836 CDC42SE2Q9NRR3 84 aa6.52□□□□□ -1.37
CDH1-205ENST00000562836 WDR87Q6ZQQ6 2873 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 FRYLO94915 3013 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 GGNQ86UU5 652 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 ORMDL1Q9P0S3 153 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 TRIOBPQ9H2D6 2365 aa6.51□□□□□ -1.37
CDH1-205ENST00000562836 CFAP54Q96N23 3096 aa6.5□□□□□ -1.37
CDH1-205ENST00000562836 RNF223E7ERA6 249 aa6.5□□□□□ -1.37
CDH1-205ENST00000562836 LECT2O14960 151 aa6.5□□□□□ -1.37
CDH1-205ENST00000562836 C9orf47Q6ZRZ4 202 aa6.5□□□□□ -1.37
CDH1-205ENST00000562836 LYZP61626 148 aa6.5□□□□□ -1.37
CDH1-205ENST00000562836 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
CDH1-205ENST00000562836 LMO4P61968 165 aa6.49□□□□□ -1.37
CDH1-205ENST00000562836 WDFY3Q8IZQ1 3526 aa6.49□□□□□ -1.37
CDH1-205ENST00000562836 MGPP08493 103 aa6.49□□□□□ -1.37
CDH1-205ENST00000562836 SAA1P0DJI8 122 aaPredicted RBP6.49□□□□□ -1.37
CDH1-205ENST00000562836 Q8N814 137 aa6.49□□□□□ -1.37
CDH1-205ENST00000562836 URB1O60287 2271 aaKnown RBP6.48□□□□□ -1.37
CDH1-205ENST00000562836 C1orf134Q5TEV5 83 aa6.48□□□□□ -1.37
CDH1-205ENST00000562836 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
CDH1-205ENST00000562836 ERHP84090 104 aaKnown RBP6.48□□□□□ -1.37
CDH1-205ENST00000562836 IGKV3D-15A0A087WSY6 115 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 IGHV3-21A0A0B4J1V1 117 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 MRPL33O75394 65 aaKnown RBP6.47□□□□□ -1.37
CDH1-205ENST00000562836 IGLV1-51P01701 117 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 RPL36AP83881 106 aaKnown RBP6.47□□□□□ -1.37
CDH1-205ENST00000562836 FBXL19-AS1Q494R0 122 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
CDH1-205ENST00000562836 C9orf66Q5T8R8 295 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 S4R3C0 116 aa6.47□□□□□ -1.37
CDH1-205ENST00000562836 JMJD7-PLA2G4BH0Y9G9 81 aa6.46□□□□□ -1.37
CDH1-205ENST00000562836 OCR1Q9BZK8 76 aa6.46□□□□□ -1.37
CDH1-205ENST00000562836 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.38
CDH1-205ENST00000562836 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.38
CDH1-205ENST00000562836 IGHV3-9P01782 118 aa6.46□□□□□ -1.38
CDH1-205ENST00000562836 C1orf229Q6ZS94 237 aaPredicted RBP6.46□□□□□ -1.38
CDH1-205ENST00000562836 IGHV3-64DA0A0J9YX35 117 aa6.45□□□□□ -1.38
CDH1-205ENST00000562836 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
CDH1-205ENST00000562836 C9orf106Q8NAJ2 232 aa6.45□□□□□ -1.38
CDH1-205ENST00000562836 Q8NAQ8 132 aa6.45□□□□□ -1.38
CDH1-205ENST00000562836 IGHV7-4-1A0A0J9YVY3 117 aa6.43□□□□□ -1.38
CDH1-205ENST00000562836 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
CDH1-205ENST00000562836 ABCA4P78363 2273 aa6.43□□□□□ -1.38
CDH1-205ENST00000562836 RNASE1P07998 156 aaKnown RBP6.43□□□□□ -1.38
CDH1-205ENST00000562836 LY6G6EA0A0G2JKS1 128 aa6.42□□□□□ -1.38
CDH1-205ENST00000562836 M0R2N4 97 aa6.42□□□□□ -1.38
CDH1-205ENST00000562836 U3KQA8 63 aa6.42□□□□□ -1.38
CDH1-205ENST00000562836 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
CDH1-205ENST00000562836 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 H0YGX0 51 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 CRPP02741 224 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 ZNF702PQ9H963 129 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
CDH1-205ENST00000562836 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms