RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 P0C879 139 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 EBI3Q14213 229 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 C11orf71Q6IPW1 123 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
RPAP1-204ENST00000562303 PLAC8L1A1L4L8 177 aa8.34□□□□□ -1.08
RPAP1-204ENST00000562303 M0R378 163 aa8.34□□□□□ -1.08
RPAP1-204ENST00000562303 LELP1Q5T871 98 aa8.34□□□□□ -1.08
RPAP1-204ENST00000562303 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
RPAP1-204ENST00000562303 NANOS2P60321 138 aaKnown RBP8.33□□□□□ -1.08
RPAP1-204ENST00000562303 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
RPAP1-204ENST00000562303 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
RPAP1-204ENST00000562303 IGLV2-8P01709 118 aa8.33□□□□□ -1.08
RPAP1-204ENST00000562303 C18orf65Q6ZTR6 163 aa8.33□□□□□ -1.08
RPAP1-204ENST00000562303 WFDC13Q8IUB5 93 aa8.33□□□□□ -1.08
RPAP1-204ENST00000562303 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
RPAP1-204ENST00000562303 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
RPAP1-204ENST00000562303 C11orf1Q9H5F2 150 aa8.32□□□□□ -1.08
RPAP1-204ENST00000562303 ATP5EP2Q5VTU8 51 aa8.32□□□□□ -1.08
RPAP1-204ENST00000562303 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 BRWD1-AS2P59051 145 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 OXLD1Q5BKU9 147 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 WNK1Q9H4A3 2382 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 ADAMTS9Q9P2N4 1935 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 G3V4G9 280 aa8.31□□□□□ -1.08
RPAP1-204ENST00000562303 BDP1A6H8Y1 2624 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 OTOGLQ3ZCN5 2332 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 TMEM131Q92545 1883 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 FAM236DA0A1B0GTK5 79 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 NUPR2A6NF83 97 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 FAM236CP0DP71 79 aa8.3□□□□□ -1.08
RPAP1-204ENST00000562303 PLA2G2AP14555 144 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 Q6ZQY7 126 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 RNASE8Q8TDE3 154 aaKnown RBP8.29□□□□□ -1.08
RPAP1-204ENST00000562303 DENND4CQ5VZ89 1909 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 A8MZ25 164 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 TRIAP1O43715 76 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 IGHV4-30-4P0DP06 118 aa8.29□□□□□ -1.08
RPAP1-204ENST00000562303 Q8N9L7 120 aa8.28□□□□□ -1.08
RPAP1-204ENST00000562303 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
RPAP1-204ENST00000562303 ACACBO00763 2458 aa8.28□□□□□ -1.08
RPAP1-204ENST00000562303 TECTAO75443 2155 aa8.27□□□□□ -1.08
RPAP1-204ENST00000562303 CRIP1P50238 77 aa8.27□□□□□ -1.09
RPAP1-204ENST00000562303 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
RPAP1-204ENST00000562303 RETNQ9HD89 108 aa8.27□□□□□ -1.09
RPAP1-204ENST00000562303 DSCAML1Q8TD84 2053 aa8.27□□□□□ -1.09
RPAP1-204ENST00000562303 TSHBP01222 138 aa8.27□□□□□ -1.09
RPAP1-204ENST00000562303 RNF185Q96GF1 192 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 SONP18583 2426 aaKnown RBP8.26□□□□□ -1.09
RPAP1-204ENST00000562303 TRBV27A0A0K0K1C4 114 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 PRM2P04554 102 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 DENND4AQ7Z401 1863 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 SMR3AQ99954 134 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
RPAP1-204ENST00000562303 Q6ZS46 218 aa8.25□□□□□ -1.09
RPAP1-204ENST00000562303 UQCRQO14949 82 aa8.25□□□□□ -1.09
RPAP1-204ENST00000562303 NDUFV3P56181 108 aaKnown RBP8.25□□□□□ -1.09
RPAP1-204ENST00000562303 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
RPAP1-204ENST00000562303 SPG11Q96JI7 2443 aa8.25□□□□□ -1.09
RPAP1-204ENST00000562303 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 Q6ZPA2 131 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 FAM240AA0A1B0GVK7 77 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
RPAP1-204ENST00000562303 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
RPAP1-204ENST00000562303 EIF4EBP1Q13541 118 aaPredicted RBP8.24□□□□□ -1.09
RPAP1-204ENST00000562303 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 SORL1Q92673 2214 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 Q6ZVQ6 151 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 FAM19A3Q7Z5A8 133 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 CUL9Q8IWT3 2517 aa8.24□□□□□ -1.09
RPAP1-204ENST00000562303 PRR4Q16378 134 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 MBD6Q96DN6 1003 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 PTPN13Q12923 2485 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 TIMM17BO60830 172 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 M0QXV9 152 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 IGLV1-40P01703 118 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 Q8N6K4 173 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 CIRBP-AS1Q8TBR5 109 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 U3KQK5 164 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 NCOA6Q14686 2063 aaPredicted RBP8.23□□□□□ -1.09
RPAP1-204ENST00000562303 COX17Q14061 63 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
RPAP1-204ENST00000562303 V9GYY9 64 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 PRR9Q5T870 116 aa8.23□□□□□ -1.09
RPAP1-204ENST00000562303 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
RPAP1-204ENST00000562303 CYSRT1A8MQ03 144 aa8.22□□□□□ -1.09
RPAP1-204ENST00000562303 NDUFA7O95182 113 aa8.22□□□□□ -1.09
RPAP1-204ENST00000562303 SNURFQ9Y675 71 aa8.22□□□□□ -1.09
RPAP1-204ENST00000562303 OBSL1O75147 1896 aa8.22□□□□□ -1.09
RPAP1-204ENST00000562303 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.09
RPAP1-204ENST00000562303 KLLNB2CW77 178 aa8.21□□□□□ -1.09
RPAP1-204ENST00000562303 FSHBP01225 129 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms