RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 LGI3Q8N145 548 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 SLC35G3Q8N808 338 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 CYB561D1Q8N8Q1 229 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 FER1L6-AS1Q8NA97 138 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF738Q8NE65 137 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 MAFIPQ8WZ33 124 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TVP23CQ96ET8 276 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 PACRGQ96M98 296 aaPredicted RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ODF3Q96PU9 254 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TP53RKQ96S44 253 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 RSG1Q9BU20 258 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 GTSF1LQ9H1H1 148 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 ENY2Q9NPA8 101 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 MRPL36Q9P0J6 103 aaKnown RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 GSKIPQ9P0R6 139 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 PKIGQ9Y2B9 76 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 KLF12Q9Y4X4 402 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TIMM9Q9Y5J7 89 aa1.63□□□□□ -2.15
LRRC28-218ENST00000560236 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
LRRC28-218ENST00000560236 TGIF2-C20orf24A0A0A6YYL0 155 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRAV8-2A0A0B4J237 113 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRAV4A0A0B4J268 109 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRAV12-3A0A0B4J271 114 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 PIGBOS1A0A0B4J2F0 54 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 C3orf85A0A1B0GTC6 90 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 A0A1B0GV90 55 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 PGPA6NDG6 321 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 FAM24AA6NFZ4 105 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF727A8MUV8 499 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 M0R036 132 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 PPP1R2P9O14990 202 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 MPDU1O75352 247 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 GCGP01275 180 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 IGKV1-5P01602 117 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRGC2P03986 189 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRGC1P0CF51 173 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 GZMBP10144 247 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 RAB4AP20338 218 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 FGF7P21781 194 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 G6PCP35575 357 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TAGLN2P37802 199 aaKnown RBP1.62□□□□□ -2.15
LRRC28-218ENST00000560236 SELENOTP62341 195 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 SERF2P84101 59 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 RAB31Q13636 194 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 MOBPQ13875 183 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 SP6Q3SY56 376 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 KCNIP4Q6PIL6 250 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TMEM14EPQ6UXP3 125 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 ZNF818PQ6ZRF7 136 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 OR10D4PQ8NGN7 298 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 OR5C1Q8NGR4 320 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 OR51H1Q8NH63 302 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 FAM213BQ8TBF2 198 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 DIRC1Q969H9 104 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 UBE2WQ96B02 151 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 ACY3Q96HD9 319 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 IMMP2LQ96T52 175 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 ATP5SQ99766 215 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 PRADC1Q9BSG0 188 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 SMIM3Q9BZL3 60 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 EIF5A2Q9GZV4 153 aaKnown RBP1.62□□□□□ -2.15
LRRC28-218ENST00000560236 LINC00474Q9P2X8 69 aa1.62□□□□□ -2.15
LRRC28-218ENST00000560236 LSM5Q9Y4Y9 91 aaKnown RBP1.62□□□□□ -2.15
LRRC28-218ENST00000560236 TRAV9-1A0A075B6T8 112 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 CTXND1A0A1B0GTU2 59 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 SMCO3A2RU48 225 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 PGLYRP1O75594 196 aaPredicted RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 CST7O76096 145 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 CRPP02741 224 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 CRISP2P16562 243 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 RPL7P18124 248 aaKnown RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 S100A2P29034 98 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 S100GP29377 79 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 NDUFA6P56556 154 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 MEF2BQ02080 365 aaPredicted RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 RHOHQ15669 191 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 MIAQ16674 131 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 MAJINQ3KP22 176 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 TEX43Q6ZNM6 134 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 S100A7AQ86SG5 101 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 RNF182Q8N6D2 247 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 OR4C5Q8NGB2 326 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 OR10P1Q8NGE3 313 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 PFDN5Q99471 154 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 SNHG12Q9BXW3 62 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 WDR61Q9GZS3 305 aaKnown RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 SLC25A22Q9H936 323 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 MRPL16Q9NX20 251 aaKnown RBP1.61□□□□□ -2.15
LRRC28-218ENST00000560236 NAT8Q9UHE5 227 aa1.61□□□□□ -2.15
LRRC28-218ENST00000560236 TRBV20OR9-2A0A075B6H5 130 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 IGLV4-69A0A075B6H9 119 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 IGLV10-54A0A075B6I4 117 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 A0A087WX48 190 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 C7orf71A4D174 169 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 MAP1LC3B2A6NCE7 125 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 TSTD3H0UI37 97 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 SYNGR2O43760 224 aa1.6□□□□□ -2.15
LRRC28-218ENST00000560236 SSSCA1O60232 199 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms