RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 YPEL4Q96NS1 127 aa10.42□□□□□ -0.74
CSPG4P12-202ENST00000559989 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
CSPG4P12-202ENST00000559989 SMIM11BQ8TCY0 68 aa10.42□□□□□ -0.74
CSPG4P12-202ENST00000559989 SPAG11AQ6PDA7 123 aa10.42□□□□□ -0.74
CSPG4P12-202ENST00000559989 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
CSPG4P12-202ENST00000559989 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
CSPG4P12-202ENST00000559989 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
CSPG4P12-202ENST00000559989 TRBV7-7A0A0K0K1E9 115 aa10.41□□□□□ -0.74
CSPG4P12-202ENST00000559989 LST1O00453 97 aa10.41□□□□□ -0.74
CSPG4P12-202ENST00000559989 Q6ZTI0 123 aa10.4□□□□□ -0.74
CSPG4P12-202ENST00000559989 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
CSPG4P12-202ENST00000559989 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.75
CSPG4P12-202ENST00000559989 PROK2Q9HC23 129 aa10.4□□□□□ -0.75
CSPG4P12-202ENST00000559989 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
CSPG4P12-202ENST00000559989 MUC7Q8TAX7 377 aa10.39□□□□□ -0.75
CSPG4P12-202ENST00000559989 EXPH5Q8NEV8 1989 aa10.38□□□□□ -0.75
CSPG4P12-202ENST00000559989 RPL37AP8A6NKH3 93 aa10.38□□□□□ -0.75
CSPG4P12-202ENST00000559989 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
CSPG4P12-202ENST00000559989 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
CSPG4P12-202ENST00000559989 CRYGAP11844 174 aa10.38□□□□□ -0.75
CSPG4P12-202ENST00000559989 DSCAMO60469 2012 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 H0Y9P7 68 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 TANC1Q9C0D5 1861 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 FAM215AQ9Y5M1 114 aa10.37□□□□□ -0.75
CSPG4P12-202ENST00000559989 A8MZ25 164 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 RSPO1Q2MKA7 263 aaPredicted RBP10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 CEP192Q8TEP8 1941 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 ROS1P08922 2347 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 CXCL6P80162 114 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 LOC100131303A0A0U1RQF7 123 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 DEFB1P60022 68 aa10.36□□□□□ -0.75
CSPG4P12-202ENST00000559989 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 TET2Q6N021 2002 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 RPL28P46779 137 aaKnown RBP10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 SPINK1P00995 79 aa10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 ZNF73O43830 326 aaPredicted RBP10.35□□□□□ -0.75
CSPG4P12-202ENST00000559989 IGHV6-1A0A0B4J1U7 121 aa10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 ZNF843Q8N446 348 aa10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 SPINT4Q6UDR6 99 aa10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 LINC01547P58512 204 aaPredicted RBP10.34□□□□□ -0.75
CSPG4P12-202ENST00000559989 SPRNQ5BIV9 151 aa10.33□□□□□ -0.76
CSPG4P12-202ENST00000559989 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
CSPG4P12-202ENST00000559989 hDV103S1A0JD37 113 aa10.32□□□□□ -0.76
CSPG4P12-202ENST00000559989 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
CSPG4P12-202ENST00000559989 U3KQK5 164 aa10.32□□□□□ -0.76
CSPG4P12-202ENST00000559989 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
CSPG4P12-202ENST00000559989 PCOTHQ58A44 107 aa10.31□□□□□ -0.76
CSPG4P12-202ENST00000559989 ACACAQ13085 2346 aa10.31□□□□□ -0.76
CSPG4P12-202ENST00000559989 M0QY20 66 aa10.31□□□□□ -0.76
CSPG4P12-202ENST00000559989 REG3GQ6UW15 175 aa10.31□□□□□ -0.76
CSPG4P12-202ENST00000559989 NTM-AS1Q6ZSK4 140 aa10.31□□□□□ -0.76
CSPG4P12-202ENST00000559989 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 KRTAP27-1Q3LI81 207 aa10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 XGP55808 180 aa10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 ALPK3Q96L96 1907 aa10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 LELP1Q5T871 98 aa10.3□□□□□ -0.76
CSPG4P12-202ENST00000559989 A0A1B0GU69 56 aa10.29□□□□□ -0.76
CSPG4P12-202ENST00000559989 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
CSPG4P12-202ENST00000559989 C7orf65Q6ZTY9 151 aa10.29□□□□□ -0.76
CSPG4P12-202ENST00000559989 RBX1P62877 108 aa10.28□□□□□ -0.76
CSPG4P12-202ENST00000559989 FRMD6-AS1P0C7T7 363 aa10.28□□□□□ -0.76
CSPG4P12-202ENST00000559989 GRNP28799 593 aaKnown RBP10.28□□□□□ -0.76
CSPG4P12-202ENST00000559989 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
CSPG4P12-202ENST00000559989 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
CSPG4P12-202ENST00000559989 Q8N814 137 aa10.27□□□□□ -0.76
CSPG4P12-202ENST00000559989 GDF5OSQ5U4N7 250 aa10.27□□□□□ -0.77
CSPG4P12-202ENST00000559989 PRLHP81277 87 aa10.27□□□□□ -0.77
CSPG4P12-202ENST00000559989 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
CSPG4P12-202ENST00000559989 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
CSPG4P12-202ENST00000559989 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 Q8IZM0 81 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 PRO0628Q9UI54 55 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 E7EUB6 86 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 LINC00959A0A1B0GUT2 108 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 M0R2N4 97 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 LTBP1Q14766 1721 aa10.26□□□□□ -0.77
CSPG4P12-202ENST00000559989 Q8N7P7 452 aa10.25□□□□□ -0.77
CSPG4P12-202ENST00000559989 KPRPQ5T749 579 aaPredicted RBP10.25□□□□□ -0.77
CSPG4P12-202ENST00000559989 K7EQG2 157 aa10.25□□□□□ -0.77
CSPG4P12-202ENST00000559989 COL4A5P29400 1685 aa10.25□□□□□ -0.77
CSPG4P12-202ENST00000559989 Q6ZSR3 168 aa10.24□□□□□ -0.77
CSPG4P12-202ENST00000559989 TRBV10-3A0A0K0K1G6 114 aa10.24□□□□□ -0.77
CSPG4P12-202ENST00000559989 DAZAP2Q15038 168 aaPredicted RBP10.24□□□□□ -0.77
CSPG4P12-202ENST00000559989 PRORYQ9H606 182 aa10.24□□□□□ -0.77
CSPG4P12-202ENST00000559989 HCG22E2RYF7 251 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 TSHBP01222 138 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 IGLV2-14P01704 120 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
CSPG4P12-202ENST00000559989 NUPR2A6NF83 97 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms