RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NRACQ8N912 160 aa8.03□□□□□ -1.12
SMAD3-208ENST00000558827 OR5A1Q8NGJ0 315 aa8.03□□□□□ -1.12
SMAD3-208ENST00000558827 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
SMAD3-208ENST00000558827 CCL25O15444 150 aa8.02□□□□□ -1.13
SMAD3-208ENST00000558827 FCER1GP30273 86 aa8.02□□□□□ -1.13
SMAD3-208ENST00000558827 FAM104BQ5XKR9 115 aa8.02□□□□□ -1.13
SMAD3-208ENST00000558827 IGHV3-64A0A075B6Q5 118 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 TRBV27A0A0K0K1C4 114 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 H7C423 109 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 J3QL48 77 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 VCYO14598 125 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 FOXI1Q12951 378 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 CFAP161Q6P656 301 aa8.01□□□□□ -1.13
SMAD3-208ENST00000558827 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
SMAD3-208ENST00000558827 CKS2P33552 79 aa8□□□□□ -1.13
SMAD3-208ENST00000558827 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
SMAD3-208ENST00000558827 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
SMAD3-208ENST00000558827 CNBPP62633 177 aaKnown RBP8□□□□□ -1.13
SMAD3-208ENST00000558827 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
SMAD3-208ENST00000558827 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
SMAD3-208ENST00000558827 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-208ENST00000558827 IGKV2-24A0A0C4DH68 120 aa7.99□□□□□ -1.13
SMAD3-208ENST00000558827 ZNF25P17030 456 aaPredicted RBP7.99□□□□□ -1.13
SMAD3-208ENST00000558827 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
SMAD3-208ENST00000558827 COX6A2Q02221 97 aa7.99□□□□□ -1.13
SMAD3-208ENST00000558827 ZNF664Q8N3J9 261 aa7.99□□□□□ -1.13
SMAD3-208ENST00000558827 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
SMAD3-208ENST00000558827 D6R8Y8 96 aa7.98□□□□□ -1.13
SMAD3-208ENST00000558827 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
SMAD3-208ENST00000558827 SS18Q15532 418 aa7.98□□□□□ -1.13
SMAD3-208ENST00000558827 PRSS3P2Q8NHM4 247 aa7.98□□□□□ -1.13
SMAD3-208ENST00000558827 A0A087WYN8 130 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 TRAV13-1A0A0B4J241 112 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 TCAPO15273 167 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 TNFRSF6BO95407 300 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 NPYP01303 97 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
SMAD3-208ENST00000558827 HBBP68871 147 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 UQCC3Q6UW78 93 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 Q6ZUT4 128 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 KIR2DL4Q99706 377 aa7.97□□□□□ -1.13
SMAD3-208ENST00000558827 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
SMAD3-208ENST00000558827 A0A1B0GXF2 115 aa7.96□□□□□ -1.14
SMAD3-208ENST00000558827 PPP1R17O96001 155 aa7.96□□□□□ -1.14
SMAD3-208ENST00000558827 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
SMAD3-208ENST00000558827 MRPL52Q86TS9 123 aaKnown RBP7.96□□□□□ -1.14
SMAD3-208ENST00000558827 OPRPNQ99935 248 aaPredicted RBP7.96□□□□□ -1.14
SMAD3-208ENST00000558827 UBE2D4Q9Y2X8 147 aa7.96□□□□□ -1.14
SMAD3-208ENST00000558827 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
SMAD3-208ENST00000558827 A0A1B0GW15 77 aa7.95□□□□□ -1.14
SMAD3-208ENST00000558827 PPP1R2P9O14990 202 aa7.95□□□□□ -1.14
SMAD3-208ENST00000558827 C5orf38Q86SI9 138 aa7.95□□□□□ -1.14
SMAD3-208ENST00000558827 IGHV1-58A0A0C4DH39 117 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 LOC389332A0A1B0GUA5 103 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 LINC00862A6NCI5 91 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 F8W036 122 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 CD164L2Q6UWJ8 174 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
SMAD3-208ENST00000558827 TRBV24-1A0A075B6N3 115 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 A0A096LNI7 61 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 S100A8P05109 93 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 MALP21145 153 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
SMAD3-208ENST00000558827 TMEM136Q6ZRR5 245 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 C20orf78Q9BR46 151 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 SMIM2Q9BVW6 85 aa7.93□□□□□ -1.14
SMAD3-208ENST00000558827 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-208ENST00000558827 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
SMAD3-208ENST00000558827 PNRC1Q12796 327 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-208ENST00000558827 STPG4Q8N801 248 aa7.92□□□□□ -1.14
SMAD3-208ENST00000558827 PRELID3AQ96N28 172 aa7.92□□□□□ -1.14
SMAD3-208ENST00000558827 IGLV4-69A0A075B6H9 119 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 TMEM218A2RU14 115 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 C1orf196B1AJZ1 125 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 COX7A2LO14548 114 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 SYCNQ0VAF6 134 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 ORMDL3Q8N138 153 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 FAM104AQ969W3 186 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 TMEM18Q96B42 140 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
SMAD3-208ENST00000558827 PHOX2AO14813 284 aa7.9□□□□□ -1.14
SMAD3-208ENST00000558827 SMAGPQ0VAQ4 97 aa7.9□□□□□ -1.14
SMAD3-208ENST00000558827 Q6ZRU5 148 aa7.9□□□□□ -1.14
SMAD3-208ENST00000558827 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
SMAD3-208ENST00000558827 CSDC2Q9Y534 153 aaKnown RBP7.9□□□□□ -1.14
SMAD3-208ENST00000558827 A0A0J9YXV3 536 aa7.89□□□□□ -1.15
SMAD3-208ENST00000558827 RPL32P62910 135 aaKnown RBP7.89□□□□□ -1.15
SMAD3-208ENST00000558827 GAGE2BQ13066 116 aa7.89□□□□□ -1.15
SMAD3-208ENST00000558827 ZC2HC1BQ5TFG8 222 aa7.89□□□□□ -1.15
SMAD3-208ENST00000558827 ATP5L2Q7Z4Y8 100 aa7.89□□□□□ -1.15
SMAD3-208ENST00000558827 TIMM21Q9BVV7 248 aa7.89□□□□□ -1.15
SMAD3-208ENST00000558827 PPBPP02775 128 aa7.88□□□□□ -1.15
SMAD3-208ENST00000558827 RAB5AP20339 215 aa7.88□□□□□ -1.15
SMAD3-208ENST00000558827 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
SMAD3-208ENST00000558827 SEC11CQ9BY50 192 aa7.88□□□□□ -1.15
SMAD3-208ENST00000558827 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
SMAD3-208ENST00000558827 ADCYAP1P18509 176 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms