RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ENHOQ6UWT2 76 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 LINC00336Q6ZUF6 198 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 PKD1P98161 4303 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 NUPR1O60356 82 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 SERF1AO75920 110 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
TPM1-214ENST00000558544 NXT2Q9NPJ8 142 aaKnown RBP11.67□□□□□ -0.54
TPM1-214ENST00000558544 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 IFITM10A6NMD0 228 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
TPM1-214ENST00000558544 TNP2Q05952 138 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 REG3AQ06141 175 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 PRR34Q9NV39 138 aa11.67□□□□□ -0.54
TPM1-214ENST00000558544 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
TPM1-214ENST00000558544 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
TPM1-214ENST00000558544 MRPL52Q86TS9 123 aaKnown RBP11.66□□□□□ -0.54
TPM1-214ENST00000558544 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
TPM1-214ENST00000558544 URB1-AS1Q96HZ7 61 aa11.66□□□□□ -0.54
TPM1-214ENST00000558544 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
TPM1-214ENST00000558544 PSCAO43653 123 aa11.65□□□□□ -0.55
TPM1-214ENST00000558544 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.55
TPM1-214ENST00000558544 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.55
TPM1-214ENST00000558544 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 MIAQ16674 131 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 RMI2Q96E14 147 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
TPM1-214ENST00000558544 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
TPM1-214ENST00000558544 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
TPM1-214ENST00000558544 K7EMI3 77 aa11.63□□□□□ -0.55
TPM1-214ENST00000558544 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
TPM1-214ENST00000558544 IGLV10-54A0A075B6I4 117 aa11.62□□□□□ -0.55
TPM1-214ENST00000558544 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
TPM1-214ENST00000558544 Q6ZUT4 128 aa11.61□□□□□ -0.55
TPM1-214ENST00000558544 FA2HQ7L5A8 372 aa11.61□□□□□ -0.55
TPM1-214ENST00000558544 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
TPM1-214ENST00000558544 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
TPM1-214ENST00000558544 CSDC2Q9Y534 153 aaKnown RBP11.61□□□□□ -0.55
TPM1-214ENST00000558544 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
TPM1-214ENST00000558544 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
TPM1-214ENST00000558544 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
TPM1-214ENST00000558544 HIST1H2BLQ99880 126 aa11.6□□□□□ -0.55
TPM1-214ENST00000558544 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
TPM1-214ENST00000558544 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
TPM1-214ENST00000558544 A0A1B0GVY2 172 aa11.59□□□□□ -0.55
TPM1-214ENST00000558544 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
TPM1-214ENST00000558544 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
TPM1-214ENST00000558544 S100A2P29034 98 aa11.58□□□□□ -0.56
TPM1-214ENST00000558544 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
TPM1-214ENST00000558544 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.56
TPM1-214ENST00000558544 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
TPM1-214ENST00000558544 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 A0A087WTM6 91 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 LINC00614P0C842 121 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 FABP4P15090 132 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 DNAH5Q8TE73 4624 aa11.57□□□□□ -0.56
TPM1-214ENST00000558544 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 AP5S1Q9NUS5 200 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
TPM1-214ENST00000558544 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
TPM1-214ENST00000558544 LECT2O14960 151 aa11.55□□□□□ -0.56
TPM1-214ENST00000558544 HSBP1O75506 76 aa11.55□□□□□ -0.56
TPM1-214ENST00000558544 MRPS36P82909 103 aaKnown RBP11.55□□□□□ -0.56
TPM1-214ENST00000558544 WFDC2Q14508 124 aa11.55□□□□□ -0.56
TPM1-214ENST00000558544 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 G0S2P27469 103 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 AKR1D1P51857 326 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
TPM1-214ENST00000558544 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 EREGO14944 169 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 OR10D4PQ8NGN7 298 aa11.54□□□□□ -0.56
TPM1-214ENST00000558544 PACRGQ96M98 296 aaPredicted RBP11.54□□□□□ -0.56
TPM1-214ENST00000558544 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
TPM1-214ENST00000558544 GAGE12HA6NDE8 117 aa11.53□□□□□ -0.56
TPM1-214ENST00000558544 SS18Q15532 418 aa11.53□□□□□ -0.56
TPM1-214ENST00000558544 TMEM141Q96I45 108 aa11.53□□□□□ -0.56
TPM1-214ENST00000558544 A0A096LNJ9 63 aa11.52□□□□□ -0.57
TPM1-214ENST00000558544 IGIPA6NJ69 53 aa11.52□□□□□ -0.57
TPM1-214ENST00000558544 CCL25O15444 150 aa11.52□□□□□ -0.57
TPM1-214ENST00000558544 XCL1P47992 114 aa11.52□□□□□ -0.57
TPM1-214ENST00000558544 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.57
TPM1-214ENST00000558544 KRTAP10-2P60368 255 aa11.51□□□□□ -0.57
TPM1-214ENST00000558544 SCGB3A1Q96QR1 104 aa11.51□□□□□ -0.57
TPM1-214ENST00000558544 TIMM17AQ99595 171 aa11.51□□□□□ -0.57
TPM1-214ENST00000558544 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
TPM1-214ENST00000558544 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
TPM1-214ENST00000558544 Q6ZN92 141 aa11.5□□□□□ -0.57
TPM1-214ENST00000558544 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
TPM1-214ENST00000558544 Q8N814 137 aa11.5□□□□□ -0.57
TPM1-214ENST00000558544 USP17L23D6RBM5 183 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms