RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 ANGP03950 147 aaKnown RBP6.52□□□□□ -1.37
CUX1-216ENST00000558469 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
CUX1-216ENST00000558469 DGAT2L7PQ6IED9 249 aa6.52□□□□□ -1.37
CUX1-216ENST00000558469 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
CUX1-216ENST00000558469 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
CUX1-216ENST00000558469 OR5A1Q8NGJ0 315 aa6.52□□□□□ -1.37
CUX1-216ENST00000558469 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
CUX1-216ENST00000558469 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 S100A6P06703 90 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
CUX1-216ENST00000558469 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 OPRPNQ99935 248 aaPredicted RBP6.51□□□□□ -1.37
CUX1-216ENST00000558469 SPANXA1Q9NS26 97 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 KLK12Q9UKR0 248 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 CSDC2Q9Y534 153 aaKnown RBP6.51□□□□□ -1.37
CUX1-216ENST00000558469 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
CUX1-216ENST00000558469 LINC01549A6NIU2 74 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 M0R2N4 97 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
CUX1-216ENST00000558469 COA6Q5JTJ3 125 aaKnown RBP6.5□□□□□ -1.37
CUX1-216ENST00000558469 ERASQ7Z444 233 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 LINC00269Q8N2A0 174 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 ZNF664Q8N3J9 261 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 CDC42SE2Q9NRR3 84 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 PYGO1Q9Y3Y4 419 aa6.5□□□□□ -1.37
CUX1-216ENST00000558469 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 NBDYA0A0U1RRE5 68 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 LCE6AA0A183 80 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 K7EP13 123 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 PDZD11Q5EBL8 140 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 CLPSL2Q6UWE3 100 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 Q6ZUT4 128 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 FAM104AQ969W3 186 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 TMEM141Q96I45 108 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 KRTAP1-5Q9BYS1 174 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
CUX1-216ENST00000558469 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 VPS13DQ5THJ4 4388 aa6.49□□□□□ -1.37
CUX1-216ENST00000558469 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.48□□□□□ -1.37
CUX1-216ENST00000558469 FABP4P15090 132 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 MRPS36P82909 103 aaKnown RBP6.48□□□□□ -1.37
CUX1-216ENST00000558469 REG3AQ06141 175 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 TTC32Q5I0X7 151 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 ENHOQ6UWT2 76 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 UBE2WQ96B02 151 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
CUX1-216ENST00000558469 LEPROTL1O95214 131 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 CRPP02741 224 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 NPSP0C0P6 89 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
CUX1-216ENST00000558469 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 Q6ZN92 141 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 Q9HAA7 133 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
CUX1-216ENST00000558469 ATP5LO75964 103 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 PAPPA-AS1Q5QFB9 102 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 TEX43Q6ZNM6 134 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 Q6ZR54 194 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 BAALCQ8WXS3 180 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 IFI27L1Q96BM0 104 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 VCX2Q9H322 139 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 PRR34Q9NV39 138 aa6.46□□□□□ -1.38
CUX1-216ENST00000558469 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 TRAV13-1A0A0B4J241 112 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 IFITM10A6NMD0 228 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 PRSS1P07477 247 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 S100A2P29034 98 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 MIAQ16674 131 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 AMELXQ99217 191 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 C2orf88Q9BSF0 95 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
CUX1-216ENST00000558469 LINC00959A0A1B0GUT2 108 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 H0Y8G0 127 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
CUX1-216ENST00000558469 PMVKQ15126 192 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 SS18Q15532 418 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 CST9LQ9H4G1 147 aa6.44□□□□□ -1.38
CUX1-216ENST00000558469 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 TRAV8-4A0A0B4J246 113 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 CHCHD10Q8WYQ3 142 aaPredicted RBP6.43□□□□□ -1.38
CUX1-216ENST00000558469 RMI2Q96E14 147 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
CUX1-216ENST00000558469 C1orf43Q9BWL3 253 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 MAP1LC3CQ9BXW4 147 aa6.43□□□□□ -1.38
CUX1-216ENST00000558469 CCL25O15444 150 aa6.42□□□□□ -1.38
CUX1-216ENST00000558469 XCL1P47992 114 aa6.42□□□□□ -1.38
CUX1-216ENST00000558469 UBE2D1P51668 147 aa6.42□□□□□ -1.38
CUX1-216ENST00000558469 C1orf134Q5TEV5 83 aa6.42□□□□□ -1.38
CUX1-216ENST00000558469 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms