RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 GAGE1Q13065 139 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 GAGE4Q13068 117 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 GAGE5Q13069 117 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 HHLA3Q9XRX5 114 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
RABGGTA-204ENST00000558376 I3L3M4 83 aa7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 K7EQD1 137 aa7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
RABGGTA-204ENST00000558376 TRBV7-3A0A075B6L6 115 aa7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 RPL32P62910 135 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 ORMDL2Q53FV1 153 aa7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 C2orf66Q6UXQ4 117 aa7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 ATOH7Q8N100 152 aa7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 HSPB8Q9UJY1 196 aa7.65□□□□□ -1.18
RABGGTA-204ENST00000558376 A0A0J9YY99 117 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 SPATA45Q537H7 98 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 MAP1LC3CQ9BXW4 147 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 TRBV6-4A0A1B0GX49 114 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 ESRGQ1W209 222 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 TOMM6Q96B49 74 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 IFI27L1Q96BM0 104 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 OPRPNQ99935 248 aaPredicted RBP7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 UQCR10Q9UDW1 63 aa7.64□□□□□ -1.19
RABGGTA-204ENST00000558376 TRAV26-1A0A087WT03 109 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 A0A096LPF7 62 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 TMEM238LA0A1B0GVL6 79 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 TTC32Q5I0X7 151 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
RABGGTA-204ENST00000558376 PRSS1P07477 247 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 G0S2P27469 103 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 CRYBA4P53673 196 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 UBE2D3P61077 147 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 UBE2D2P62837 147 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 RPL36AP83881 106 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 MAJINQ3KP22 176 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 RPL36ALQ969Q0 106 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 UPK3BQ9BT76 320 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 MYCBP2O75592 4640 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 IGKV2-29A2NJV5 120 aaPredicted RBP7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 K7EMI3 77 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 GYPEP15421 78 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 XGP55808 180 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 VSIG2Q96IQ7 327 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
RABGGTA-204ENST00000558376 C20orf202A1L168 122 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 CIDEAO60543 219 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 RHOHQ15669 191 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 BATFQ16520 125 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 Q6ZRN7 208 aaPredicted RBP7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 PRADC1Q9BSG0 188 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 PRO0255Q9UI72 69 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 CYSLTR1Q9Y271 337 aa7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 MRPS16Q9Y3D3 137 aaKnown RBP7.61□□□□□ -1.19
RABGGTA-204ENST00000558376 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 PAX4O43316 350 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 HNRNPA3P51991 378 aaKnown RBP7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 COTL1Q14019 142 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 Q6ZN92 141 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
RABGGTA-204ENST00000558376 LINC00694P0DN24 101 aa7.59□□□□□ -1.19
RABGGTA-204ENST00000558376 ERASQ7Z444 233 aa7.59□□□□□ -1.19
RABGGTA-204ENST00000558376 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
RABGGTA-204ENST00000558376 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
RABGGTA-204ENST00000558376 TRAV9-2A0A087WT02 112 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 DLEU1O43261 78 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 ATP5LO75964 103 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 BAALCQ8WXS3 180 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 FAM104AQ969W3 186 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 PGPEP1Q9NXJ5 209 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 hDV102S1A0JD36 115 aa7.58□□□□□ -1.2
RABGGTA-204ENST00000558376 A6NJY4 79 aa7.57□□□□□ -1.2
RABGGTA-204ENST00000558376 H3BNG1 76 aa7.57□□□□□ -1.2
RABGGTA-204ENST00000558376 KRTAP10-1P60331 282 aa7.57□□□□□ -1.2
RABGGTA-204ENST00000558376 ODF1Q14990 250 aa7.57□□□□□ -1.2
RABGGTA-204ENST00000558376 Q5VSD8 79 aa7.57□□□□□ -1.2
RABGGTA-204ENST00000558376 STPG4Q8N801 248 aa7.56□□□□□ -1.2
RABGGTA-204ENST00000558376 ATP6V0E2Q8NHE4 81 aa7.56□□□□□ -1.2
RABGGTA-204ENST00000558376 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
RABGGTA-204ENST00000558376 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms