RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 FABP4P15090 132 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 RPL39P62891 51 aaKnown RBP8.51□□□□□ -1.05
TPM1-209ENST00000558072 SEC11AP67812 179 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 PMCHL1Q16048 86 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 DEFB104AQ8WTQ1 72 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
TPM1-209ENST00000558072 C20orf202A1L168 122 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 DNAH10OSP0CZ25 163 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 RBX1P62877 108 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 LGALS9CQ6DKI2 356 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 ZNF664Q8N3J9 261 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
TPM1-209ENST00000558072 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
TPM1-209ENST00000558072 PMVKQ15126 192 aa8.49□□□□□ -1.05
TPM1-209ENST00000558072 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
TPM1-209ENST00000558072 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
TPM1-209ENST00000558072 Q9H8V8 135 aa8.49□□□□□ -1.05
TPM1-209ENST00000558072 PLECQ15149 4684 aaKnown RBP8.48□□□□□ -1.05
TPM1-209ENST00000558072 IGLV4-3A0A075B6K6 122 aa8.48□□□□□ -1.05
TPM1-209ENST00000558072 CRPP02741 224 aa8.48□□□□□ -1.05
TPM1-209ENST00000558072 ANGP03950 147 aaKnown RBP8.48□□□□□ -1.05
TPM1-209ENST00000558072 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
TPM1-209ENST00000558072 TRAV8-4A0A0B4J246 113 aa8.47□□□□□ -1.05
TPM1-209ENST00000558072 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
TPM1-209ENST00000558072 WFDC10BQ8IUB3 73 aa8.47□□□□□ -1.05
TPM1-209ENST00000558072 RMI2Q96E14 147 aa8.47□□□□□ -1.05
TPM1-209ENST00000558072 AMELXQ99217 191 aa8.47□□□□□ -1.05
TPM1-209ENST00000558072 TRAV8-3A0A0A6YYJ7 113 aa8.46□□□□□ -1.06
TPM1-209ENST00000558072 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
TPM1-209ENST00000558072 SS18Q15532 418 aa8.46□□□□□ -1.06
TPM1-209ENST00000558072 BAALCQ8WXS3 180 aa8.46□□□□□ -1.06
TPM1-209ENST00000558072 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 KRTDAPP60985 99 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 MIAQ16674 131 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
TPM1-209ENST00000558072 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 PRSS29PA6NIE9 313 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 PLNP26678 52 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 REG3AQ06141 175 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 Q6ZUT4 128 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 Q8N976 141 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 KLK12Q9UKR0 248 aa8.44□□□□□ -1.06
TPM1-209ENST00000558072 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TPM1-209ENST00000558072 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
TPM1-209ENST00000558072 F8VRH5 84 aa8.43□□□□□ -1.06
TPM1-209ENST00000558072 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
TPM1-209ENST00000558072 HERVK_113P63121 156 aa8.43□□□□□ -1.06
TPM1-209ENST00000558072 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
TPM1-209ENST00000558072 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
TPM1-209ENST00000558072 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
TPM1-209ENST00000558072 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
TPM1-209ENST00000558072 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
TPM1-209ENST00000558072 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 TINCRA0A1B0GVN0 87 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 H0Y8G0 127 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 H3BRM9 83 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 DPM2O94777 84 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 UBE2D1P51668 147 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 LINC00173Q6ZV60 143 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 Q8N3U1 123 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
TPM1-209ENST00000558072 LY6G6CO95867 125 aa8.4□□□□□ -1.06
TPM1-209ENST00000558072 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
TPM1-209ENST00000558072 ODF1Q14990 250 aa8.4□□□□□ -1.06
TPM1-209ENST00000558072 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
TPM1-209ENST00000558072 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
TPM1-209ENST00000558072 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
TPM1-209ENST00000558072 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 IGKCP01834 107 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 FAM104AQ969W3 186 aa8.39□□□□□ -1.07
TPM1-209ENST00000558072 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 IGKV3OR2-268A0A0C4DH90 116 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 HERVK_113P61574 105 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 JOSD1Q15040 202 aaPredicted RBP8.38□□□□□ -1.07
TPM1-209ENST00000558072 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
TPM1-209ENST00000558072 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 MRPL35Q9NZE8 188 aaKnown RBP8.38□□□□□ -1.07
TPM1-209ENST00000558072 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 VPS13DQ5THJ4 4388 aa8.38□□□□□ -1.07
TPM1-209ENST00000558072 LYSTQ99698 3801 aa8.37□□□□□ -1.07
TPM1-209ENST00000558072 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
TPM1-209ENST00000558072 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms