RNA–Protein interactions for RNA: ENST00000556986.1

KLC1-221, Transcript of kinesin light chain 1, humanhuman

TSL 1 (best)

Gene KLC1, Length 1,150 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-221ENST00000556986 TMEM101Q96IK0 257 aa13.99□□□□□ -0.17
KLC1-221ENST00000556986 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
KLC1-221ENST00000556986 CDC42SE2Q9NRR3 84 aa13.99□□□□□ -0.17
KLC1-221ENST00000556986 IGKV3OR2-268A0A0C4DH90 116 aa13.98□□□□□ -0.17
KLC1-221ENST00000556986 EPM2AB3EWF7 344 aa13.98□□□□□ -0.17
KLC1-221ENST00000556986 PHOX2AO14813 284 aa13.98□□□□□ -0.17
KLC1-221ENST00000556986 FCER1GP30273 86 aa13.98□□□□□ -0.17
KLC1-221ENST00000556986 GAGE12HA6NDE8 117 aa13.97□□□□□ -0.17
KLC1-221ENST00000556986 NPYP01303 97 aa13.97□□□□□ -0.17
KLC1-221ENST00000556986 SMR3BP02814 79 aaPredicted RBP13.97□□□□□ -0.17
KLC1-221ENST00000556986 CHCHD10Q8WYQ3 142 aaPredicted RBP13.97□□□□□ -0.17
KLC1-221ENST00000556986 CSDC2Q9Y534 153 aaKnown RBP13.97□□□□□ -0.17
KLC1-221ENST00000556986 C9orf163Q8N9P6 203 aa13.96□□□□□ -0.17
KLC1-221ENST00000556986 SMIM2Q9BVW6 85 aa13.96□□□□□ -0.17
KLC1-221ENST00000556986 UBE2D4Q9Y2X8 147 aa13.96□□□□□ -0.17
KLC1-221ENST00000556986 LINC00959A0A1B0GUT2 108 aa13.95□□□□□ -0.18
KLC1-221ENST00000556986 ORMDL3Q8N138 153 aa13.95□□□□□ -0.18
KLC1-221ENST00000556986 ZNF664Q8N3J9 261 aa13.95□□□□□ -0.18
KLC1-221ENST00000556986 C15orf56Q8N910 161 aa13.95□□□□□ -0.18
KLC1-221ENST00000556986 SEC11CQ9BY50 192 aa13.95□□□□□ -0.18
KLC1-221ENST00000556986 TCAPO15273 167 aa13.94□□□□□ -0.18
KLC1-221ENST00000556986 CNBPP62633 177 aaKnown RBP13.94□□□□□ -0.18
KLC1-221ENST00000556986 Q5VSD8 79 aa13.94□□□□□ -0.18
KLC1-221ENST00000556986 TMEM136Q6ZRR5 245 aa13.94□□□□□ -0.18
KLC1-221ENST00000556986 IMMP2LQ96T52 175 aa13.94□□□□□ -0.18
KLC1-221ENST00000556986 SLPIP03973 132 aa13.93□□□□□ -0.18
KLC1-221ENST00000556986 FOXI1Q12951 378 aa13.93□□□□□ -0.18
KLC1-221ENST00000556986 TIMM21Q9BVV7 248 aa13.93□□□□□ -0.18
KLC1-221ENST00000556986 hDV102S1A0JD36 115 aa13.92□□□□□ -0.18
KLC1-221ENST00000556986 PRSS47A8MTI9 375 aa13.92□□□□□ -0.18
KLC1-221ENST00000556986 COMMD7Q86VX2 200 aa13.92□□□□□ -0.18
KLC1-221ENST00000556986 PRELID3AQ96N28 172 aa13.92□□□□□ -0.18
KLC1-221ENST00000556986 SMAGPQ0VAQ4 97 aa13.91□□□□□ -0.18
KLC1-221ENST00000556986 CFAP161Q6P656 301 aa13.91□□□□□ -0.18
KLC1-221ENST00000556986 SCXQ7RTU7 201 aa13.91□□□□□ -0.18
KLC1-221ENST00000556986 CHAC1Q9BUX1 264 aa13.91□□□□□ -0.18
KLC1-221ENST00000556986 CTDSP1Q9GZU7 261 aa13.91□□□□□ -0.18
KLC1-221ENST00000556986 CCL25O15444 150 aa13.9□□□□□ -0.18
KLC1-221ENST00000556986 C10orf91Q5T1B1 145 aa13.9□□□□□ -0.18
KLC1-221ENST00000556986 TMEM18Q96B42 140 aa13.9□□□□□ -0.18
KLC1-221ENST00000556986 LAMTOR2Q9Y2Q5 125 aa13.9□□□□□ -0.18
KLC1-221ENST00000556986 SDIM1Q6ZPB5 146 aa13.89□□□□□ -0.19
KLC1-221ENST00000556986 FAM104AQ969W3 186 aa13.89□□□□□ -0.19
KLC1-221ENST00000556986 FAM229AH3BQW9 127 aa13.88□□□□□ -0.19
KLC1-221ENST00000556986 XCL1P47992 114 aa13.88□□□□□ -0.19
KLC1-221ENST00000556986 RPL39P62891 51 aaKnown RBP13.88□□□□□ -0.19
KLC1-221ENST00000556986 SS18Q15532 418 aa13.88□□□□□ -0.19
KLC1-221ENST00000556986 AP5S1Q9NUS5 200 aa13.88□□□□□ -0.19
KLC1-221ENST00000556986 CD164L2Q6UWJ8 174 aa13.87□□□□□ -0.19
KLC1-221ENST00000556986 CIRBP-AS1Q8TBR5 109 aa13.87□□□□□ -0.19
KLC1-221ENST00000556986 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
KLC1-221ENST00000556986 GVQW2A0A096LPI5 108 aaPredicted RBP13.86□□□□□ -0.19
KLC1-221ENST00000556986 Q6ZUT4 128 aa13.86□□□□□ -0.19
KLC1-221ENST00000556986 SRRM2Q9UQ35 2752 aaKnown RBP13.86□□□□□ -0.19
KLC1-221ENST00000556986 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
KLC1-221ENST00000556986 CARHSP1Q9Y2V2 147 aaKnown RBP13.85□□□□□ -0.19
KLC1-221ENST00000556986 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.84□□□□□ -0.19
KLC1-221ENST00000556986 C1orf196B1AJZ1 125 aa13.84□□□□□ -0.19
KLC1-221ENST00000556986 HIGD2BQ4VC39 106 aa13.84□□□□□ -0.19
KLC1-221ENST00000556986 SPANXA1Q9NS26 97 aa13.84□□□□□ -0.19
KLC1-221ENST00000556986 MRPS36P82909 103 aaKnown RBP13.83□□□□□ -0.2
KLC1-221ENST00000556986 MAP1LC3AQ9H492 121 aa13.83□□□□□ -0.2
KLC1-221ENST00000556986 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.83□□□□□ -0.2
KLC1-221ENST00000556986 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 IGHV1-58A0A0C4DH39 117 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 PANO1I0J062 215 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 RAB5AP20339 215 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 CIRBPQ14011 172 aaKnown RBP13.82□□□□□ -0.2
KLC1-221ENST00000556986 LINC00528Q8N1L1 170 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 Q8N8P6 123 aa13.82□□□□□ -0.2
KLC1-221ENST00000556986 LOC389332A0A1B0GUA5 103 aa13.81□□□□□ -0.2
KLC1-221ENST00000556986 INAFM2P0DMQ5 153 aa13.81□□□□□ -0.2
KLC1-221ENST00000556986 TRAV13-1A0A0B4J241 112 aa13.8□□□□□ -0.2
KLC1-221ENST00000556986 OPRPNQ99935 248 aaPredicted RBP13.8□□□□□ -0.2
KLC1-221ENST00000556986 PYGO1Q9Y3Y4 419 aa13.8□□□□□ -0.2
KLC1-221ENST00000556986 RHEBQ15382 184 aa13.78□□□□□ -0.2
KLC1-221ENST00000556986 S100PP25815 95 aa13.77□□□□□ -0.21
KLC1-221ENST00000556986 GNB1LQ9BYB4 327 aa13.77□□□□□ -0.21
KLC1-221ENST00000556986 K7EMI3 77 aa13.76□□□□□ -0.21
KLC1-221ENST00000556986 COX7A2LO14548 114 aa13.76□□□□□ -0.21
KLC1-221ENST00000556986 PLA2G1BP04054 148 aaKnown RBP13.76□□□□□ -0.21
KLC1-221ENST00000556986 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
KLC1-221ENST00000556986 IFI27P40305 119 aaPredicted RBP13.75□□□□□ -0.21
KLC1-221ENST00000556986 KRTAP10-4P60372 401 aaPredicted RBP13.75□□□□□ -0.21
KLC1-221ENST00000556986 LINC00526Q96FQ7 95 aa13.75□□□□□ -0.21
KLC1-221ENST00000556986 NXT2Q9NPJ8 142 aaKnown RBP13.75□□□□□ -0.21
KLC1-221ENST00000556986 IGLV4-3A0A075B6K6 122 aa13.74□□□□□ -0.21
KLC1-221ENST00000556986 RPS10P5Q9NQ39 176 aa13.74□□□□□ -0.21
KLC1-221ENST00000556986 FLG2Q5D862 2391 aaPredicted RBP13.73□□□□□ -0.21
KLC1-221ENST00000556986 IGHV3OR16-9A0A0B4J2B5 98 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 CHTF8P0CG12 524 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 COX6A2Q02221 97 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 ORMDL2Q53FV1 153 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 C2orf66Q6UXQ4 117 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 C5orf38Q86SI9 138 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 PRSS3P2Q8NHM4 247 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 SPACA4Q8TDM5 124 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 CYSLTR1Q9Y271 337 aa13.73□□□□□ -0.21
KLC1-221ENST00000556986 ZNF561-AS1K7EIQ3 104 aa13.72□□□□□ -0.21
KLC1-221ENST00000556986 MALP21145 153 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms