RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 REG3GQ6UW15 175 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 TMEM243Q9BU79 118 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
ACTN1-221ENST00000556571 A0A1B0GW15 77 aa7.44□□□□□ -1.22
ACTN1-221ENST00000556571 S100A8P05109 93 aa7.44□□□□□ -1.22
ACTN1-221ENST00000556571 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
ACTN1-221ENST00000556571 MRAP2Q96G30 205 aa7.44□□□□□ -1.22
ACTN1-221ENST00000556571 IGKV2-24A0A0C4DH68 120 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 GAS8-AS1O95177 125 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 PPP1R17O96001 155 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 CAMPP49913 170 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 UQCC3Q6UW78 93 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 STPG4Q8N801 248 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
ACTN1-221ENST00000556571 GAGE12HA6NDE8 117 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 SDHAF1A6NFY7 115 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 F8W036 122 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 NCR2O95944 276 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 RAB4AP20338 218 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 PMCHP20382 165 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 IFITM2Q01629 132 aa7.42□□□□□ -1.22
ACTN1-221ENST00000556571 I3L3M4 83 aa7.41□□□□□ -1.22
ACTN1-221ENST00000556571 APCSP02743 223 aa7.41□□□□□ -1.22
ACTN1-221ENST00000556571 HBBP68871 147 aa7.41□□□□□ -1.22
ACTN1-221ENST00000556571 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
ACTN1-221ENST00000556571 LINC00474Q9P2X8 69 aa7.41□□□□□ -1.22
ACTN1-221ENST00000556571 TRBV6-5A0A0K0K1A5 114 aa7.4□□□□□ -1.22
ACTN1-221ENST00000556571 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
ACTN1-221ENST00000556571 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
ACTN1-221ENST00000556571 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
ACTN1-221ENST00000556571 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
ACTN1-221ENST00000556571 FCER1GP30273 86 aa7.39□□□□□ -1.23
ACTN1-221ENST00000556571 CKS2P33552 79 aa7.39□□□□□ -1.23
ACTN1-221ENST00000556571 FAM104BQ5XKR9 115 aa7.39□□□□□ -1.23
ACTN1-221ENST00000556571 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
ACTN1-221ENST00000556571 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
ACTN1-221ENST00000556571 A0A096LNI7 61 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
ACTN1-221ENST00000556571 IGKV3OR2-268A0A0C4DH90 116 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 TMEM218A2RU14 115 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 LINC00862A6NCI5 91 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 VCYO14598 125 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 RNASEKQ6P5S7 137 aaKnown RBP7.38□□□□□ -1.23
ACTN1-221ENST00000556571 Q6ZRP5 223 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 BTF3L4Q96K17 158 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 KIR2DL4Q99706 377 aa7.38□□□□□ -1.23
ACTN1-221ENST00000556571 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
ACTN1-221ENST00000556571 H7C423 109 aa7.37□□□□□ -1.23
ACTN1-221ENST00000556571 SUMO2P61956 95 aaKnown RBP7.37□□□□□ -1.23
ACTN1-221ENST00000556571 MRPL51Q4U2R6 128 aaKnown RBP7.37□□□□□ -1.23
ACTN1-221ENST00000556571 CHCHD10Q8WYQ3 142 aaPredicted RBP7.37□□□□□ -1.23
ACTN1-221ENST00000556571 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
ACTN1-221ENST00000556571 TMEM242Q9NWH2 141 aa7.37□□□□□ -1.23
ACTN1-221ENST00000556571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-221ENST00000556571 A0A1B0GXF2 115 aa7.36□□□□□ -1.23
ACTN1-221ENST00000556571 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-221ENST00000556571 PPBPP02775 128 aa7.36□□□□□ -1.23
ACTN1-221ENST00000556571 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
ACTN1-221ENST00000556571 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
ACTN1-221ENST00000556571 D6R8Y8 96 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 TSHBP01222 138 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 FGF6P10767 208 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 ZNF25P17030 456 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-221ENST00000556571 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
ACTN1-221ENST00000556571 NRACQ8N912 160 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
ACTN1-221ENST00000556571 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 TCAPO15273 167 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
ACTN1-221ENST00000556571 TRBV24-1A0A075B6N3 115 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 ADCYAP1P18509 176 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 S100PP25815 95 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 FOXI1Q12951 378 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 TMEM18Q96B42 140 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 LPAP08519 4548 aa7.33□□□□□ -1.24
ACTN1-221ENST00000556571 IGHV1-58A0A0C4DH39 117 aa7.32□□□□□ -1.24
ACTN1-221ENST00000556571 ESDP10768 282 aa7.32□□□□□ -1.24
ACTN1-221ENST00000556571 TMEM136Q6ZRR5 245 aa7.32□□□□□ -1.24
ACTN1-221ENST00000556571 CARD19Q96LW7 228 aa7.32□□□□□ -1.24
ACTN1-221ENST00000556571 PRELID3AQ96N28 172 aa7.32□□□□□ -1.24
ACTN1-221ENST00000556571 NPYP01303 97 aa7.31□□□□□ -1.24
ACTN1-221ENST00000556571 RAB5AP20339 215 aa7.31□□□□□ -1.24
ACTN1-221ENST00000556571 XCL1P47992 114 aa7.31□□□□□ -1.24
ACTN1-221ENST00000556571 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
ACTN1-221ENST00000556571 NDUFA5Q16718 116 aa7.31□□□□□ -1.24
ACTN1-221ENST00000556571 SMIM2Q9BVW6 85 aa7.31□□□□□ -1.24
ACTN1-221ENST00000556571 TRAV9-1A0A075B6T8 112 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
ACTN1-221ENST00000556571 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms