RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 K7EP13 123 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 SIVA1O15304 175 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 KRTDAPP60985 99 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 RBX1P62877 108 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 PMVKQ15126 192 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 ZNF664Q8N3J9 261 aa6.33□□□□□ -1.4
ACTN1-218ENST00000556343 CCL25O15444 150 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 ANGP03950 147 aaKnown RBP6.32□□□□□ -1.4
ACTN1-218ENST00000556343 SEC11AP67812 179 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 CDC42SE2Q9NRR3 84 aa6.32□□□□□ -1.4
ACTN1-218ENST00000556343 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 H0Y8G0 127 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 CRPP02741 224 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 SPATA12Q7Z6I5 190 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 WFDC10BQ8IUB3 73 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 BAALCQ8WXS3 180 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 Q9H8V8 135 aa6.31□□□□□ -1.4
ACTN1-218ENST00000556343 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 C3orf79P0CE67 100 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 SS18Q15532 418 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 CASC10Q5T4H9 136 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 AMELXQ99217 191 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 CST9LQ9H4G1 147 aa6.3□□□□□ -1.4
ACTN1-218ENST00000556343 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
ACTN1-218ENST00000556343 TGP01266 2768 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 TRAV8-4A0A0B4J246 113 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 TTC32Q5I0X7 151 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 Q6ZUT4 128 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 LINC00173Q6ZV60 143 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 Q8N976 141 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 RMI2Q96E14 147 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 OPRPNQ99935 248 aaPredicted RBP6.29□□□□□ -1.4
ACTN1-218ENST00000556343 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
ACTN1-218ENST00000556343 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 TRAV13-1A0A0B4J241 112 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 IGKV3OR2-268A0A0C4DH90 116 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 F8VRH5 84 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 PLNP26678 52 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 REG3AQ06141 175 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 LINC00269Q8N2A0 174 aa6.28□□□□□ -1.4
ACTN1-218ENST00000556343 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
ACTN1-218ENST00000556343 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.41
ACTN1-218ENST00000556343 TINCRA0A1B0GVN0 87 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 DPM2O94777 84 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 HERVK_113P63121 156 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 MIAQ16674 131 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 UBE2WQ96B02 151 aa6.27□□□□□ -1.41
ACTN1-218ENST00000556343 LINC00959A0A1B0GUT2 108 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 IBA57-AS1B1ANH7 110 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 HSBP1L1C9JCN9 74 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 H3BRM9 83 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 IGKCP01834 107 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 UBE2D1P51668 147 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 ODF1Q14990 250 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
ACTN1-218ENST00000556343 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
ACTN1-218ENST00000556343 PRR34Q9NV39 138 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 COX11Q9Y6N1 276 aa6.26□□□□□ -1.41
ACTN1-218ENST00000556343 CSMD3Q7Z407 3707 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 LOC105371267A0A1B0GV96 52 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 LY6G6CO95867 125 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 IGLC3P0DOY3 106 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 HERVK_113P61574 105 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 ZC2HC1BQ5TFG8 222 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 FAM19A3Q7Z5A8 133 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 TM2D2Q9BX73 214 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 MRPL35Q9NZE8 188 aaKnown RBP6.25□□□□□ -1.41
ACTN1-218ENST00000556343 STARD9Q9P2P6 4700 aa6.25□□□□□ -1.41
ACTN1-218ENST00000556343 A0A0J9YXV3 536 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 LINC00469Q8N7U9 141 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 CHCHD10Q8WYQ3 142 aaPredicted RBP6.24□□□□□ -1.41
ACTN1-218ENST00000556343 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 CHAC1Q9BUX1 264 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 C1orf43Q9BWL3 253 aa6.24□□□□□ -1.41
ACTN1-218ENST00000556343 NBDYA0A0U1RRE5 68 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 S100A12P80511 92 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 TMEM170BQ5T4T1 132 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 ENHOQ6UWT2 76 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms