RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 UBE2D4Q9Y2X8 147 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 IGKV2D-24A0A075B6R9 120 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 TRGC2P03986 189 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 G0S2P27469 103 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 C18orf32Q8TCD1 76 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
SNX6-206ENST00000556162 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
SNX6-206ENST00000556162 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.9
SNX6-206ENST00000556162 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
SNX6-206ENST00000556162 TNP2Q05952 138 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 CYSLTR1Q9Y271 337 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
SNX6-206ENST00000556162 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
SNX6-206ENST00000556162 RAB5BP61020 215 aa9.44□□□□□ -0.9
SNX6-206ENST00000556162 LINC00614P0C842 121 aa9.43□□□□□ -0.9
SNX6-206ENST00000556162 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
SNX6-206ENST00000556162 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
SNX6-206ENST00000556162 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
SNX6-206ENST00000556162 DNAH11Q96DT5 4516 aa9.42□□□□□ -0.9
SNX6-206ENST00000556162 MRPS36P82909 103 aaKnown RBP9.41□□□□□ -0.9
SNX6-206ENST00000556162 Q6ZUT4 128 aa9.41□□□□□ -0.9
SNX6-206ENST00000556162 PKD1P98161 4303 aa9.41□□□□□ -0.9
SNX6-206ENST00000556162 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
SNX6-206ENST00000556162 EREGO14944 169 aa9.4□□□□□ -0.9
SNX6-206ENST00000556162 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
SNX6-206ENST00000556162 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
SNX6-206ENST00000556162 URB1-AS1Q96HZ7 61 aa9.4□□□□□ -0.9
SNX6-206ENST00000556162 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.9
SNX6-206ENST00000556162 EPPK1P58107 5090 aaKnown RBP9.4□□□□□ -0.9
SNX6-206ENST00000556162 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.91
SNX6-206ENST00000556162 SS18Q15532 418 aa9.4□□□□□ -0.91
SNX6-206ENST00000556162 BAGE3Q86Y29 109 aa9.4□□□□□ -0.91
SNX6-206ENST00000556162 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.91
SNX6-206ENST00000556162 A0A087WTM6 91 aa9.39□□□□□ -0.91
SNX6-206ENST00000556162 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 IGIPA6NJ69 53 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 NPSP0C0P6 89 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 Q6ZN92 141 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
SNX6-206ENST00000556162 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 SCGB3A1Q96QR1 104 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 HECTD4Q9Y4D8 3996 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 TRAV13-1A0A0B4J241 112 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 LRCOL1A6NCL2 159 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 C1orf196B1AJZ1 125 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 CCL25O15444 150 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 ERASQ7Z444 233 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
SNX6-206ENST00000556162 TIMM17AQ99595 171 aa9.38□□□□□ -0.91
SNX6-206ENST00000556162 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
SNX6-206ENST00000556162 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
SNX6-206ENST00000556162 VCX2Q9H322 139 aa9.37□□□□□ -0.91
SNX6-206ENST00000556162 A0A1B0GVY2 172 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 LECT2O14960 151 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 HBDP02042 147 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 XCL1P47992 114 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
SNX6-206ENST00000556162 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
SNX6-206ENST00000556162 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
SNX6-206ENST00000556162 A0A096LNJ9 63 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 HSBP1O75506 76 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 WFDC2Q14508 124 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 AMELXQ99217 191 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 Q8N814 137 aa9.34□□□□□ -0.91
SNX6-206ENST00000556162 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BKO60814 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BJP06899 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BOP23527 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BBP33778 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BDP58876 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BCP62807 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 FOXI1Q12951 378 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST2H2BEQ16778 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BHQ93079 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BNQ99877 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 HIST1H2BMQ99879 126 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
SNX6-206ENST00000556162 SERF1AO75920 110 aa9.32□□□□□ -0.92
SNX6-206ENST00000556162 C14orf177Q52M58 125 aa9.32□□□□□ -0.92
SNX6-206ENST00000556162 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
SNX6-206ENST00000556162 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
SNX6-206ENST00000556162 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
SNX6-206ENST00000556162 LINC00173Q6ZV60 143 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms