RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LYRM9A8MSI8 78 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 H7C423 109 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 HERVK_113P61574 105 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 SEC11AP67812 179 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 HSD52Q0P140 79 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 SMAGPQ0VAQ4 97 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 OR11H2Q8NH07 326 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 UBE2D4Q9Y2X8 147 aa5.87□□□□□ -1.47
ATXN3-235ENST00000556082 NACAE9PAV3 2078 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 TRBV25-1A0A075B6N4 114 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 A8MZ25 164 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 LINC00694P0DN24 101 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 BATFQ16520 125 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 TAL2Q16559 108 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 SBSPONQ8IVN8 264 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 MAPKAPK5-AS1Q8N8E1 139 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 OPRPNQ99935 248 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-235ENST00000556082 PRADC1Q9BSG0 188 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 TP73-AS1Q9UF72 201 aa5.86□□□□□ -1.47
ATXN3-235ENST00000556082 NIPBLQ6KC79 2804 aaeCLIP5.85□□□□□ -1.47
ATXN3-235ENST00000556082 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 TRGV4A0A0C4DH28 118 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 MIFP14174 115 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 EGFEM1PQ0D2K5 195 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 C3orf56Q8N813 242 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 PHLDA1Q8WV24 401 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-235ENST00000556082 TM2D2Q9BX73 214 aa5.85□□□□□ -1.47
ATXN3-235ENST00000556082 TEP1Q99973 2627 aaKnown RBP5.85□□□□□ -1.47
ATXN3-235ENST00000556082 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 IGHV3-38A0A0C4DH36 116 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 TMEM223A0PJW6 202 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE12JA6NER3 117 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 TIRAPP58753 221 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE1Q13065 139 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE4Q13068 117 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE5Q13069 117 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE13Q4V321 117 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 NTM-AS1Q6ZSK4 140 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 FAM19A3Q7Z5A8 133 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 RNF183Q96D59 192 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 CHAC1Q9BUX1 264 aa5.84□□□□□ -1.47
ATXN3-235ENST00000556082 ATRQ13535 2644 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-235ENST00000556082 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 IGKV2-29A2NJV5 120 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-235ENST00000556082 IGHV4-30-4P0DP06 118 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 ZNF22P17026 224 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-235ENST00000556082 EMP1P54849 157 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 TCTAP57738 103 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 DGAT2L7PQ6IED9 249 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
ATXN3-235ENST00000556082 NOTCH3Q9UM47 2321 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 IGLV5-45A0A087WSX0 123 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 A6NDN8 102 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 LEPROTO15243 131 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 DEFB130BP0DP73 79 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 DEFB130AP0DP74 79 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 ZNF25P17030 456 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-235ENST00000556082 UBE2D1P51668 147 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 CEMP1Q6PRD7 247 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-235ENST00000556082 PRIMA1Q86XR5 153 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 Q8NAQ8 132 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 PLEKHB2Q96CS7 222 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 TMEM243Q9BU79 118 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 TTTY13Q9BZ97 58 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 PRO0255Q9UI72 69 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 COX11Q9Y6N1 276 aa5.82□□□□□ -1.48
ATXN3-235ENST00000556082 TRBV6-8A0A0A6YYG3 113 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 IGHV4-28A0A0C4DH34 117 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 TEX48A0A1B0GUV7 120 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 ZNF815PA8K554 130 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 H3BRM9 83 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 J3QQQ9 107 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 DEFB135Q30KP9 77 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 FAM222AQ5U5X8 452 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 Q6ZUT4 128 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 CEND1Q8N111 149 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 CDC42SE2Q9NRR3 84 aa5.81□□□□□ -1.48
ATXN3-235ENST00000556082 VWFP04275 2813 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 CYSRT1A8MQ03 144 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 SPART-AS1P0CW21 52 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 KRTAP10-11P60412 298 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 OR5A1Q8NGJ0 315 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 TMEM101Q96IK0 257 aa5.8□□□□□ -1.48
ATXN3-235ENST00000556082 SPANXB1Q9NS25 103 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-235ENST00000556082 TRAV26-1A0A087WT03 109 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 IGHV1-58A0A0C4DH39 117 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 A0A0J9YY99 117 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 UBE2L6O14933 153 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 GYPEP15421 78 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 LGALS3P17931 250 aaKnown RBP5.79□□□□□ -1.48
ATXN3-235ENST00000556082 HERVK_113P63121 156 aa5.79□□□□□ -1.48
ATXN3-235ENST00000556082 ATP6V0E2Q8NHE4 81 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms