RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
SRP54-208ENST00000555557 MRPL23Q16540 153 aaKnown RBP7.08□□□□□ -1.28
SRP54-208ENST00000555557 AMMECR1LQ6DCA0 310 aa7.08□□□□□ -1.28
SRP54-208ENST00000555557 ICOSQ9Y6W8 199 aa7.08□□□□□ -1.28
SRP54-208ENST00000555557 BVES-AS1Q5T3Y7 98 aa7.07□□□□□ -1.28
SRP54-208ENST00000555557 MPV17L2Q567V2 206 aa7.07□□□□□ -1.28
SRP54-208ENST00000555557 C20orf203Q8NBC4 194 aa7.07□□□□□ -1.28
SRP54-208ENST00000555557 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
SRP54-208ENST00000555557 TRBV6-8A0A0A6YYG3 113 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 IGLL5B9A064 214 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 H3BNG1 76 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 SLC25A34Q6PIV7 304 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 CEMP1Q6PRD7 247 aaPredicted RBP7.06□□□□□ -1.28
SRP54-208ENST00000555557 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 CYSLTR1Q9Y271 337 aa7.06□□□□□ -1.28
SRP54-208ENST00000555557 H0Y8G0 127 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 GTF2H5Q6ZYL4 71 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
SRP54-208ENST00000555557 TRBV25-1A0A075B6N4 114 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 PMCHL2Q9BQD1 86 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
SRP54-208ENST00000555557 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
SRP54-208ENST00000555557 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
SRP54-208ENST00000555557 LYPD5Q6UWN5 251 aa7.04□□□□□ -1.28
SRP54-208ENST00000555557 IFI27L1Q96BM0 104 aa7.04□□□□□ -1.28
SRP54-208ENST00000555557 TMEM243Q9BU79 118 aa7.04□□□□□ -1.28
SRP54-208ENST00000555557 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 GAGE6Q13070 117 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 ZC2HC1BQ5TFG8 222 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 ERASQ7Z444 233 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 SPATA12Q7Z6I5 190 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
SRP54-208ENST00000555557 UBE2L6O14933 153 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 SEC11AP67812 179 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 ESRGQ1W209 222 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
SRP54-208ENST00000555557 TMEM262E9PQX1 116 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 PRSS1P07477 247 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 FGF6P10767 208 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 TMEM97Q5BJF2 176 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
SRP54-208ENST00000555557 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 CSMD3Q7Z407 3707 aa7.02□□□□□ -1.29
SRP54-208ENST00000555557 TRAV8-6A0A0B4J262 113 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 SYS1-DBNDD2H3BUS1 97 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 ATP5LO75964 103 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 Q8N3U1 123 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 C15orf53Q8NAA6 179 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 DNAH7Q8WXX0 4024 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 LELP1Q5T871 98 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 BAALCQ8WXS3 180 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
SRP54-208ENST00000555557 DYNC2H1Q8NCM8 4307 aaKnown RBP7.01□□□□□ -1.29
SRP54-208ENST00000555557 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
SRP54-208ENST00000555557 H3BRM9 83 aa7□□□□□ -1.29
SRP54-208ENST00000555557 ZFAND6Q6FIF0 208 aa7□□□□□ -1.29
SRP54-208ENST00000555557 DGAT2L7PQ6IED9 249 aa7□□□□□ -1.29
SRP54-208ENST00000555557 SPANXA1Q9NS26 97 aa7□□□□□ -1.29
SRP54-208ENST00000555557 PYGO1Q9Y3Y4 419 aa7□□□□□ -1.29
SRP54-208ENST00000555557 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 hDV102S1A0JD36 115 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 A6NDN8 102 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 Q6ZUT4 128 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 PLECQ15149 4684 aaKnown RBP6.99□□□□□ -1.29
SRP54-208ENST00000555557 STARD9Q9P2P6 4700 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 PRSS29PA6NIE9 313 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 K7EP34 96 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 WFDC10BQ8IUB3 73 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 APLNQ9ULZ1 77 aa6.99□□□□□ -1.29
SRP54-208ENST00000555557 NUPR2A6NF83 97 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 H7C423 109 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 TIRAPP58753 221 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 LYSTQ99698 3801 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 TIMM21Q9BVV7 248 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 VCX2Q9H322 139 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 CDC42SE2Q9NRR3 84 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
SRP54-208ENST00000555557 A0A1B0GV72 72 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 COX8AP10176 69 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
SRP54-208ENST00000555557 KMT2CQ8NEZ4 4911 aaKnown RBP6.97□□□□□ -1.29
SRP54-208ENST00000555557 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 ODF1Q14990 250 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 PMVKQ15126 192 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 AMELXQ99217 191 aa6.97□□□□□ -1.29
SRP54-208ENST00000555557 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
SRP54-208ENST00000555557 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms