RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 GYPEP15421 78 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 NEXN-AS1Q8NBZ9 246 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 C12orf57Q99622 126 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 HERC1Q15751 4861 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
SHMT2-215ENST00000554656 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 IGHV3-73A0A0B4J1V6 119 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 C20orf202A1L168 122 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 KRTDAPP60985 99 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
SHMT2-215ENST00000554656 PMCHL1Q16048 86 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 Q6ZSN1 163 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
SHMT2-215ENST00000554656 TOMM6Q96B49 74 aa7.12□□□□□ -1.27
SHMT2-215ENST00000554656 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 DAZ4Q86SG3 579 aaKnown RBP7.11□□□□□ -1.27
SHMT2-215ENST00000554656 NFE4Q86UQ8 179 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 IFI27L1Q96BM0 104 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 PRADC1Q9BSG0 188 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 DAZ3Q9NR90 486 aaKnown RBP7.11□□□□□ -1.27
SHMT2-215ENST00000554656 CYSLTR1Q9Y271 337 aa7.11□□□□□ -1.27
SHMT2-215ENST00000554656 SRRM2Q9UQ35 2752 aaKnown RBP7.11□□□□□ -1.27
SHMT2-215ENST00000554656 EREGO14944 169 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 TSHBP01222 138 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 NPSP0C0P6 89 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 HAMPP81172 84 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 TMEM97Q5BJF2 176 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 Q5VSD8 79 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 SLC25A29Q8N8R3 303 aa7.1□□□□□ -1.27
SHMT2-215ENST00000554656 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 LRCOL1A6NCL2 159 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 INAFM2P0DMQ5 153 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 UBE2D3P61077 147 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 UBE2D2P62837 147 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 S100A12P80511 92 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 COTL1Q14019 142 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 LINC01545Q5VT33 79 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 ERASQ7Z444 233 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 Q8N976 141 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 C20orf203Q8NBC4 194 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 TIMM17AQ99595 171 aa7.09□□□□□ -1.27
SHMT2-215ENST00000554656 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
SHMT2-215ENST00000554656 LINC00694P0DN24 101 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 SMAGPQ0VAQ4 97 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 TMEM141Q96I45 108 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
SHMT2-215ENST00000554656 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
SHMT2-215ENST00000554656 K7EP13 123 aa7.07□□□□□ -1.28
SHMT2-215ENST00000554656 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
SHMT2-215ENST00000554656 TIRAPP58753 221 aa7.07□□□□□ -1.28
SHMT2-215ENST00000554656 PYGO1Q9Y3Y4 419 aa7.07□□□□□ -1.28
SHMT2-215ENST00000554656 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 GCSHP23434 173 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 PAPPA-AS1Q5QFB9 102 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 Q6ZN92 141 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 Q9UF83 564 aa7.06□□□□□ -1.28
SHMT2-215ENST00000554656 IGHV3-38A0A0C4DH36 116 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 GAGE12JA6NER3 117 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 H7C423 109 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 PRSS1P07477 247 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 GAGE1Q13065 139 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 GAGE4Q13068 117 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 GAGE5Q13069 117 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 GAGE13Q4V321 117 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 SH2D6Q7Z4S9 175 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 C10orf126Q8N4M7 172 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 CHCHD7Q9BUK0 85 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 SPANXA1Q9NS26 97 aa7.05□□□□□ -1.28
SHMT2-215ENST00000554656 A0A087WX48 190 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 IBA57-AS1B1ANH7 110 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 WFDC2Q14508 124 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 ODF1Q14990 250 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 Q8N3U1 123 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 VAMP8Q9BV40 100 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
SHMT2-215ENST00000554656 IGLV5-52A0A0A0MRZ9 124 aa7.03□□□□□ -1.28
SHMT2-215ENST00000554656 RPL39P62891 51 aaKnown RBP7.03□□□□□ -1.28
SHMT2-215ENST00000554656 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
SHMT2-215ENST00000554656 MRPL52Q86TS9 123 aaKnown RBP7.03□□□□□ -1.28
SHMT2-215ENST00000554656 BAALCQ8WXS3 180 aa7.03□□□□□ -1.28
SHMT2-215ENST00000554656 Q9HAA7 133 aa7.03□□□□□ -1.28
SHMT2-215ENST00000554656 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
SHMT2-215ENST00000554656 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 HSBP1L1C9JCN9 74 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 F8VRH5 84 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 TSTD3H0UI37 97 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 DPM2O94777 84 aa7.02□□□□□ -1.29
SHMT2-215ENST00000554656 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms