RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PSENENQ9NZ42 101 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 LINC00588Q9Y4M8 146 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 TRAPPC1Q9Y5R8 145 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV3-21A0A0B4J1V1 117 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV4-28A0A0C4DH34 117 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 LCE6AA0A183 80 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 SERF1AO75920 110 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGLV2-8P01709 118 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 NPPCP23582 126 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 HERVK_113P61574 105 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 RPL30P62888 115 aaKnown RBP1.96□□□□□ -2.1
PRPF39-206ENST00000554429 UBE2BP63146 152 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 FAM216BQ8N7L0 139 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 DAND5Q8N907 189 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 DEFB104AQ8WTQ1 72 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 LINC00479Q96M42 142 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 TTTY13Q9BZ97 58 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 MANBALQ9NQG1 85 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 U3KQK5 164 aa1.96□□□□□ -2.1
PRPF39-206ENST00000554429 IGLL1P15814 213 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 PDPNQ86YL7 162 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CD177Q8N6Q3 437 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 SDF2L1Q9HCN8 221 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IL36BQ9NZH7 164 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 ZNF492Q9P255 531 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 HIGD1BQ9P298 99 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 PRO0461Q9UI25 63 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 HILPDAQ9Y5L2 63 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 LYSTQ99698 3801 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV3OR15-7A0A075B7D8 119 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 C11orf94C9JXX5 98 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 TSHBP01222 138 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IGKV1-39P01597 117 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IGLV1-47P01700 117 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 HBDP02042 147 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IGKV1D-39P04432 117 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 FUSP35637 526 aaKnown RBP eCLIP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 ZNF137PP52743 207 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 SYNJ2BPP57105 145 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 ZNF876PQ49A33 203 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CEND1Q8N111 149 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 DYNAPQ8N1N2 210 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 COPS9Q8WXC6 57 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 LINC00474Q9P2X8 69 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 SACSQ9NZJ4 4579 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 HUWE1Q7Z6Z7 4374 aaKnown RBP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 TRAV2A0A0B4J234 112 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 TRAV3A0A0B4J244 114 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CGB3P0DN86 165 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CGB7P0DN87 165 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV4-30-4P0DP06 118 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 S100A4P26447 101 aaKnown RBP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 HLA-DMBP28068 263 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CRIP2P52943 208 aaPredicted RBP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 SSBP1Q04837 148 aaKnown RBP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 CASC10Q5T4H9 136 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 Q8IYB0 196 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 POM121L12Q8N7R1 296 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 URB1-AS1Q96HZ7 61 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 NXT2Q9NPJ8 142 aaKnown RBP1.95□□□□□ -2.1
PRPF39-206ENST00000554429 TMEM242Q9NWH2 141 aa1.95□□□□□ -2.1
PRPF39-206ENST00000554429 DNAH6Q9C0G6 4158 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 WNK1Q9H4A3 2382 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 NOTCH1P46531 2555 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV3OR16-12A0A075B7B8 117 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 TCRBV4S1A1TA0A5B7 111 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 PRM2P04554 102 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 SMIM13P0DJ93 91 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 ARL14EPLP0DKL9 152 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 NANOS2P60321 138 aaKnown RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 GNB1P62873 340 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 C9orf66Q5T8R8 295 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 LINC01545Q5VT33 79 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 CEMP1Q6PRD7 247 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 TMEM136Q6ZRR5 245 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 C7orf65Q6ZTY9 151 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 SBSPONQ8IVN8 264 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 Q8N6K4 173 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 MUC7Q8TAX7 377 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 CHAC1Q9BUX1 264 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 CLEC7AQ9BXN2 247 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 COL7A1Q02388 2944 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 NACAE9PAV3 2078 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 TRBV7-7A0A0K0K1E9 115 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 C17orf112F2Z3M2 114 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 ZNF324O75467 553 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 RNASE4P34096 147 aaKnown RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 UBE2G1P62253 170 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 RPL39P5Q59GN2 51 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 SFTA2Q6UW10 78 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 PHF5AQ7RTV0 110 aaKnown RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 C4orf3Q8WVX3 66 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 OPRPNQ99935 248 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-206ENST00000554429 SCRT2Q9NQ03 307 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 DPM3Q9P2X0 92 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 TP53TG3Q9ULZ0 132 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 ARL2-SNX15V9GYD0 113 aa1.94□□□□□ -2.1
PRPF39-206ENST00000554429 IGHV3OR16-8A0A075B7F1 116 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms