RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
NUMB-209ENST00000554315 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
NUMB-209ENST00000554315 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
NUMB-209ENST00000554315 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
NUMB-209ENST00000554315 SNAPINO95295 136 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 APOC3P02656 99 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 WFDC2Q14508 124 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 SVBPQ8N300 66 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 ZNF664Q8N3J9 261 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 CDC42SE2Q9NRR3 84 aa9.07□□□□□ -0.96
NUMB-209ENST00000554315 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
NUMB-209ENST00000554315 CCL25O15444 150 aa9.06□□□□□ -0.96
NUMB-209ENST00000554315 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
NUMB-209ENST00000554315 KRTAP26-1Q6PEX3 210 aa9.06□□□□□ -0.96
NUMB-209ENST00000554315 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
NUMB-209ENST00000554315 GNB1LQ9BYB4 327 aa9.06□□□□□ -0.96
NUMB-209ENST00000554315 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
NUMB-209ENST00000554315 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
NUMB-209ENST00000554315 SS18Q15532 418 aa9.05□□□□□ -0.96
NUMB-209ENST00000554315 K7EMI3 77 aa9.05□□□□□ -0.96
NUMB-209ENST00000554315 UBE2D4Q9Y2X8 147 aa9.05□□□□□ -0.96
NUMB-209ENST00000554315 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
NUMB-209ENST00000554315 G0S2P27469 103 aa9.04□□□□□ -0.96
NUMB-209ENST00000554315 CHCHD10Q8WYQ3 142 aaPredicted RBP9.04□□□□□ -0.96
NUMB-209ENST00000554315 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 MT-ND6P03923 174 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 Q8N8P6 123 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
NUMB-209ENST00000554315 SPANXA1Q9NS26 97 aa9.03□□□□□ -0.96
NUMB-209ENST00000554315 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.96
NUMB-209ENST00000554315 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.96
NUMB-209ENST00000554315 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
NUMB-209ENST00000554315 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
NUMB-209ENST00000554315 PRSS1P07477 247 aa9□□□□□ -0.97
NUMB-209ENST00000554315 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
NUMB-209ENST00000554315 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
NUMB-209ENST00000554315 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
NUMB-209ENST00000554315 TRAV16A0A0A6YYK6 109 aaPredicted RBP9□□□□□ -0.97
NUMB-209ENST00000554315 hDV102S1A0JD36 115 aa9□□□□□ -0.97
NUMB-209ENST00000554315 XCL1P47992 114 aa9□□□□□ -0.97
NUMB-209ENST00000554315 RPL39P62891 51 aaKnown RBP9□□□□□ -0.97
NUMB-209ENST00000554315 MRPS36P82909 103 aaKnown RBP9□□□□□ -0.97
NUMB-209ENST00000554315 FABP9Q0Z7S8 132 aa9□□□□□ -0.97
NUMB-209ENST00000554315 KIAA1644Q3SXP7 199 aa9□□□□□ -0.97
NUMB-209ENST00000554315 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
NUMB-209ENST00000554315 PRSS3P2Q8NHM4 247 aa8.99□□□□□ -0.97
NUMB-209ENST00000554315 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
NUMB-209ENST00000554315 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
NUMB-209ENST00000554315 FOXI1Q12951 378 aa8.98□□□□□ -0.97
NUMB-209ENST00000554315 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
NUMB-209ENST00000554315 TRAV13-1A0A0B4J241 112 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 XGP55808 180 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 C9orf163Q8N9P6 203 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 CNBPP62633 177 aaKnown RBP8.97□□□□□ -0.97
NUMB-209ENST00000554315 Q6ZUT4 128 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 ALKBH7Q9BT30 221 aaPredicted RBP8.97□□□□□ -0.97
NUMB-209ENST00000554315 TRAPPC1Q9Y5R8 145 aa8.97□□□□□ -0.97
NUMB-209ENST00000554315 NPSP0C0P6 89 aa8.96□□□□□ -0.98
NUMB-209ENST00000554315 MALP21145 153 aa8.96□□□□□ -0.98
NUMB-209ENST00000554315 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
NUMB-209ENST00000554315 TGIF2-C20orf24A0A0A6YYL0 155 aa8.95□□□□□ -0.98
NUMB-209ENST00000554315 COX7A2LO14548 114 aa8.95□□□□□ -0.98
NUMB-209ENST00000554315 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
NUMB-209ENST00000554315 PAPPA-AS1Q5QFB9 102 aa8.95□□□□□ -0.98
NUMB-209ENST00000554315 Q6ZN92 141 aa8.95□□□□□ -0.98
NUMB-209ENST00000554315 HERC2O95714 4834 aa8.95□□□□□ -0.98
NUMB-209ENST00000554315 Q8N1X5 172 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 C15orf56Q8N910 161 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 VCX2Q9H322 139 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
NUMB-209ENST00000554315 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 APOMO95445 188 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 Q6ZSA8 131 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 SLC7A5P1Q8MH63 180 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 SMCO4Q9NRQ5 59 aa8.94□□□□□ -0.98
NUMB-209ENST00000554315 RYR1P21817 5038 aa8.93□□□□□ -0.98
NUMB-209ENST00000554315 ZNF561-AS1K7EIQ3 104 aa8.93□□□□□ -0.98
NUMB-209ENST00000554315 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
NUMB-209ENST00000554315 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
NUMB-209ENST00000554315 C2orf88Q9BSF0 95 aa8.93□□□□□ -0.98
NUMB-209ENST00000554315 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
NUMB-209ENST00000554315 IGLV4-3A0A075B6K6 122 aa8.92□□□□□ -0.98
NUMB-209ENST00000554315 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
NUMB-209ENST00000554315 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
NUMB-209ENST00000554315 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 FAM104AQ969W3 186 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 LINC01546A6NGU7 62 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 FAM229AH3BQW9 127 aa8.91□□□□□ -0.98
NUMB-209ENST00000554315 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms