RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
LINC00517-202ENST00000554257 IGLV4-69A0A075B6H9 119 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 HBDP02042 147 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
LINC00517-202ENST00000554257 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 BAALCQ8WXS3 180 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 KIR2DL4Q99706 377 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 KLK5Q9Y337 293 aaPredicted RBP4.53□□□□□ -1.68
LINC00517-202ENST00000554257 FGF6P10767 208 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 ZNF25P17030 456 aaPredicted RBP4.53□□□□□ -1.68
LINC00517-202ENST00000554257 AMTP48728 403 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 RBX1P62877 108 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 Q6ZUT4 128 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 SPANXA1Q9NS26 97 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 ZC2HC1BQ5TFG8 222 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
LINC00517-202ENST00000554257 FA2HQ7L5A8 372 aa4.52□□□□□ -1.69
LINC00517-202ENST00000554257 ERASQ7Z444 233 aa4.52□□□□□ -1.69
LINC00517-202ENST00000554257 BAGE3Q86Y29 109 aa4.52□□□□□ -1.69
LINC00517-202ENST00000554257 IGLV5-45A0A087WSX0 123 aa4.52□□□□□ -1.69
LINC00517-202ENST00000554257 UBE2D1P51668 147 aa4.52□□□□□ -1.69
LINC00517-202ENST00000554257 TRAV12-1A0A0B4J245 112 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 GAGE6Q13070 117 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 ZNF664Q8N3J9 261 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 TMEM141Q96I45 108 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 Q9H8V8 135 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 LINC01549A6NIU2 74 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 ODF1Q14990 250 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 MAPKAPK5-AS1Q8N8E1 139 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 CST9LQ9H4G1 147 aa4.51□□□□□ -1.69
LINC00517-202ENST00000554257 IGLC3P0DOY3 106 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 OR5A1Q8NGJ0 315 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 SIVA1O15304 175 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 C3orf79P0CE67 100 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 COX6A2Q02221 97 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 NFE4Q86UQ8 179 aa4.5□□□□□ -1.69
LINC00517-202ENST00000554257 K7EP13 123 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 BTF3P20290 206 aaKnown RBP4.49□□□□□ -1.69
LINC00517-202ENST00000554257 FOXI1Q12951 378 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 LCE6AA0A183 80 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 HSBP1O75506 76 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 CCL18P55774 89 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
LINC00517-202ENST00000554257 IFI27L1Q96BM0 104 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 TMA7Q9Y2S6 64 aaKnown RBP4.49□□□□□ -1.69
LINC00517-202ENST00000554257 NBDYA0A0U1RRE5 68 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 SYS1-DBNDD2H3BUS1 97 aa4.49□□□□□ -1.69
LINC00517-202ENST00000554257 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
LINC00517-202ENST00000554257 A0A087WX48 190 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 PKIAP61925 76 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 SCGB3A1Q96QR1 104 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 CHCHD5Q9BSY4 110 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 IGHV3-30P01768 117 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 IGHV3-33P01772 117 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 IGHV3-30-3P0DP02 117 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 IGHV3-30-5P0DP03 117 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 LINC00269Q8N2A0 174 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 ATP5LO75964 103 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 G0S2P27469 103 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 PMVKQ15126 192 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
LINC00517-202ENST00000554257 TINCRA0A1B0GVN0 87 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 FABP4P15090 132 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 REG3AQ06141 175 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 CDPF1Q6NVV7 123 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 VPS13BQ7Z7G8 4022 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
LINC00517-202ENST00000554257 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
LINC00517-202ENST00000554257 C11orf86A6NJI1 115 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 ZNF22P17026 224 aaPredicted RBP4.46□□□□□ -1.7
LINC00517-202ENST00000554257 C15orf56Q8N910 161 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 KLK12Q9UKR0 248 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
LINC00517-202ENST00000554257 UBE2L6O14933 153 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 RTL8CO15255 209 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 LINC01561Q8N1V8 128 aa4.46□□□□□ -1.7
LINC00517-202ENST00000554257 IGLV5-39A0A0G2JS06 123 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 A0A0J9YXV3 536 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 F8VRH5 84 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 CCL25O15444 150 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 WFDC2Q14508 124 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 PYY3Q5JQD4 70 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 MRPL35Q9NZE8 188 aaKnown RBP4.45□□□□□ -1.7
LINC00517-202ENST00000554257 ANGP03950 147 aaKnown RBP4.45□□□□□ -1.7
LINC00517-202ENST00000554257 MIAQ16674 131 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
LINC00517-202ENST00000554257 NTN5Q8WTR8 489 aaPredicted RBP4.45□□□□□ -1.7
LINC00517-202ENST00000554257 A0A087WZ39 114 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms