RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TTC32Q5I0X7 151 aa9.92□□□□□ -0.82
SHMT2-210ENST00000553950 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
SHMT2-210ENST00000553950 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
SHMT2-210ENST00000553950 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
SHMT2-210ENST00000553950 IFI27L1Q96BM0 104 aa9.91□□□□□ -0.82
SHMT2-210ENST00000553950 STARD9Q9P2P6 4700 aa9.9□□□□□ -0.82
SHMT2-210ENST00000553950 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
SHMT2-210ENST00000553950 CRPP02741 224 aa9.9□□□□□ -0.82
SHMT2-210ENST00000553950 ANGP03950 147 aaKnown RBP9.9□□□□□ -0.82
SHMT2-210ENST00000553950 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.82
SHMT2-210ENST00000553950 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
SHMT2-210ENST00000553950 Q6ZUT4 128 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 ZNF664Q8N3J9 261 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 HIST1H2BLQ99880 126 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 VCX2Q9H322 139 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 Q9H8V8 135 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
SHMT2-210ENST00000553950 CCL25O15444 150 aa9.88□□□□□ -0.83
SHMT2-210ENST00000553950 FABP4P15090 132 aa9.88□□□□□ -0.83
SHMT2-210ENST00000553950 AKR1D1P51857 326 aa9.88□□□□□ -0.83
SHMT2-210ENST00000553950 TRAV12-1A0A0B4J245 112 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 C20orf202A1L168 122 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 PMVKQ15126 192 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 Q8N976 141 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
SHMT2-210ENST00000553950 IGLV4-60A0A075B6I1 120 aa9.86□□□□□ -0.83
SHMT2-210ENST00000553950 PRSS1P07477 247 aa9.86□□□□□ -0.83
SHMT2-210ENST00000553950 SEC11AP67812 179 aa9.86□□□□□ -0.83
SHMT2-210ENST00000553950 AMELXQ99217 191 aa9.86□□□□□ -0.83
SHMT2-210ENST00000553950 REG3AQ06141 175 aa9.85□□□□□ -0.83
SHMT2-210ENST00000553950 MIAQ16674 131 aa9.85□□□□□ -0.83
SHMT2-210ENST00000553950 RMI2Q96E14 147 aa9.85□□□□□ -0.83
SHMT2-210ENST00000553950 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
SHMT2-210ENST00000553950 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
SHMT2-210ENST00000553950 TRAV8-3A0A0A6YYJ7 113 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 KRTDAPP60985 99 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 SS18Q15532 418 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 PET117Q6UWS5 81 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
SHMT2-210ENST00000553950 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
SHMT2-210ENST00000553950 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
SHMT2-210ENST00000553950 LY6G6CO95867 125 aa9.83□□□□□ -0.84
SHMT2-210ENST00000553950 F8VRH5 84 aa9.82□□□□□ -0.84
SHMT2-210ENST00000553950 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
SHMT2-210ENST00000553950 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
SHMT2-210ENST00000553950 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
SHMT2-210ENST00000553950 PLECQ15149 4684 aaKnown RBP9.81□□□□□ -0.84
SHMT2-210ENST00000553950 NBDYA0A0U1RRE5 68 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 H0Y8G0 127 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 C3orf79P0CE67 100 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 PLNP26678 52 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 UBE2D1P51668 147 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 HERVK_113P63121 156 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
SHMT2-210ENST00000553950 Q8N3U1 123 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 OPRPNQ99935 248 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-210ENST00000553950 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
SHMT2-210ENST00000553950 COX11Q9Y6N1 276 aa9.81□□□□□ -0.84
SHMT2-210ENST00000553950 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 IGKV3OR2-268A0A0C4DH90 116 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 C1orf43Q9BWL3 253 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
SHMT2-210ENST00000553950 TENM2Q9NT68 2774 aa9.8□□□□□ -0.84
SHMT2-210ENST00000553950 ALMS1Q8TCU4 4167 aa9.79□□□□□ -0.84
SHMT2-210ENST00000553950 TINCRA0A1B0GVN0 87 aa9.79□□□□□ -0.84
SHMT2-210ENST00000553950 IGLC3P0DOY3 106 aa9.79□□□□□ -0.84
SHMT2-210ENST00000553950 ODF1Q14990 250 aa9.79□□□□□ -0.84
SHMT2-210ENST00000553950 OR10D4PQ8NGN7 298 aa9.79□□□□□ -0.84
SHMT2-210ENST00000553950 LINC01545Q5VT33 79 aa9.78□□□□□ -0.84
SHMT2-210ENST00000553950 ENHOQ6UWT2 76 aa9.78□□□□□ -0.84
SHMT2-210ENST00000553950 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
SHMT2-210ENST00000553950 TM2D2Q9BX73 214 aa9.78□□□□□ -0.84
SHMT2-210ENST00000553950 DPM2O94777 84 aa9.77□□□□□ -0.85
SHMT2-210ENST00000553950 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
SHMT2-210ENST00000553950 H3BRM9 83 aa9.76□□□□□ -0.85
SHMT2-210ENST00000553950 IGKCP01834 107 aa9.76□□□□□ -0.85
SHMT2-210ENST00000553950 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
SHMT2-210ENST00000553950 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-210ENST00000553950 Q9HAA7 133 aa9.76□□□□□ -0.85
SHMT2-210ENST00000553950 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
SHMT2-210ENST00000553950 IGKV2D-24A0A075B6R9 120 aa9.75□□□□□ -0.85
SHMT2-210ENST00000553950 LCE6AA0A183 80 aa9.75□□□□□ -0.85
SHMT2-210ENST00000553950 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
SHMT2-210ENST00000553950 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
SHMT2-210ENST00000553950 LYSTQ99698 3801 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms