RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 UQCRHLA0A096LP55 91 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 C9orf170A2RU37 121 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 CDC42EP2O14613 210 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 IGLV3-1P01715 115 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 APOC1P02654 83 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 UQCRHP07919 91 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 PCBD1P61457 104 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 SNRPGP62308 76 aaKnown RBP1.08□□□□□ -2.24
SYNE2-210ENST00000553455 LINC01590Q5TEZ4 76 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 DEFB107AQ8IZN7 70 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 OR10AG1Q8NH19 301 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 TAF9BQ9HBM6 251 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 CMC2Q9NRP2 79 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 FAIMQ9NVQ4 179 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 KAAG1Q9UBP8 84 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 MED31Q9Y3C7 131 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 PRKDCP78527 4128 aaKnown RBP1.08□□□□□ -2.24
SYNE2-210ENST00000553455 VWFP04275 2813 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
SYNE2-210ENST00000553455 CPSF4LA6NMK7 179 aaKnown RBP1.07□□□□□ -2.24
SYNE2-210ENST00000553455 IQCF6A8MYZ5 107 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 H7BYZ3 331 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 NDUFA2O43678 99 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 HMGN1P05114 100 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 GUCA1AP43080 201 aaPredicted RBP1.07□□□□□ -2.24
SYNE2-210ENST00000553455 GNGT1P63211 74 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 OTOSQ8NHW6 89 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 LYSTQ99698 3801 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 NAT8BQ9UHF3 227 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 AP4S1Q9Y587 144 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 DNAH9Q9NYC9 4486 aa1.07□□□□□ -2.24
SYNE2-210ENST00000553455 MGAM2Q2M2H8 2515 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 TRDV1A0A1B0GX56 115 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 LYRM1O43325 122 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 SULT1C4O75897 302 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 FABP1P07148 127 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 VBP1P61758 197 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 OR8B8Q15620 311 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 CCDC58Q4VC31 144 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 TEX29Q8N6K0 151 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 OR5A2Q8NGI9 324 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 CCL19Q99731 98 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 NOP16Q9Y3C1 178 aaKnown RBP1.06□□□□□ -2.24
SYNE2-210ENST00000553455 MPC1Q9Y5U8 109 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 IER3IP1Q9Y5U9 82 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 V9GYS6 101 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 TANC2Q9HCD6 1990 aa1.06□□□□□ -2.24
SYNE2-210ENST00000553455 DNAH1Q9P2D7 4330 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 LOC100130705A0A1B0GUX0 176 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 A0A1W2PRE2 83 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 ATP6V1G2-DDX39BF2Z307 99 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 M0R135 149 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 IFNGP01579 166 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 RBP4P02753 201 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 PIPP12273 146 aaPredicted RBP1.05□□□□□ -2.24
SYNE2-210ENST00000553455 SRP9P49458 86 aaKnown RBP1.05□□□□□ -2.24
SYNE2-210ENST00000553455 CAV3P56539 151 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 C6orf52Q5T4I8 152 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 TMEM244Q5VVB8 128 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 PP6455Q8WZ26 134 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 SPTSSAQ969W0 71 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 SMPXQ9UHP9 88 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 DNAH6Q9C0G6 4158 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
SYNE2-210ENST00000553455 MEGF8Q7Z7M0 2845 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 HUWE1Q7Z6Z7 4374 aaKnown RBP1.04□□□□□ -2.24
SYNE2-210ENST00000553455 JMJD7-PLA2G4BH0Y9G9 81 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 M0R1W7 72 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 KPNA4O00629 521 aaPredicted RBP1.04□□□□□ -2.24
SYNE2-210ENST00000553455 GNGT2O14610 69 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 PPYP01298 95 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 CCL8P80075 99 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 MIR22HGQ0VDD5 57 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 CIRBPQ14011 172 aaKnown RBP1.04□□□□□ -2.24
SYNE2-210ENST00000553455 KLK9Q2XQG4 91 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 GLYATL3Q5SZD4 288 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 OR2T2Q6IF00 324 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 FOXI2Q6ZQN5 318 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 STX12Q86Y82 276 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 ACBD7Q8N6N7 88 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 DEFB108BQ8NET1 73 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 WFDC9Q8NEX5 89 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 SMR3AQ99954 134 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 BPESC1Q9GZL8 116 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 FAM107BQ9H098 131 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 WFDC10AQ9H1F0 79 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 LSM2Q9Y333 95 aaKnown RBP1.04□□□□□ -2.24
SYNE2-210ENST00000553455 R4GMQ9 66 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 WNK1Q9H4A3 2382 aa1.04□□□□□ -2.24
SYNE2-210ENST00000553455 NOTCH1P46531 2555 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 TGP01266 2768 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 COL7A1Q02388 2944 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 TRAV1-2A0A0B4J238 106 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 EFCAB10A6NFE3 127 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 OOSP1A8MZH6 123 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 ZNF670-ZNF695F2Z2N8 137 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 LYNX1G3V0Z9 82 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 GABARAPH6UMI1 98 aa1.03□□□□□ -2.24
SYNE2-210ENST00000553455 MT-ND6P03923 174 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms