RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 MYOM1P52179 1685 aa1.58□□□□□ -2.16
SCFD1-208ENST00000553278 GAPVD1Q14C86 1478 aa1.57□□□□□ -2.16
SCFD1-208ENST00000553278 COX17Q14061 63 aa1.57□□□□□ -2.16
SCFD1-208ENST00000553278 PROK2Q9HC23 129 aa1.57□□□□□ -2.16
SCFD1-208ENST00000553278 AKAP12Q02952 1782 aa1.57□□□□□ -2.16
SCFD1-208ENST00000553278 ZNF462Q96JM2 2506 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 TRAPPC2P0DI81 140 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 TRAPPC2BP0DI82 140 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 UBA52P62987 128 aaKnown RBP1.56□□□□□ -2.16
SCFD1-208ENST00000553278 SNHG12Q9BXW3 62 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 NPVFQ9HCQ7 196 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 LINC01558Q9Y6Z2 57 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 CHD1O14646 1710 aa1.56□□□□□ -2.16
SCFD1-208ENST00000553278 LAMC3Q9Y6N6 1575 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 MYO7AQ13402 2215 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 PIN1P1O15428 100 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 SFT2D2O95562 160 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 PMCHL2Q9BQD1 86 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 NXT2Q9NPJ8 142 aaKnown RBP1.55□□□□□ -2.16
SCFD1-208ENST00000553278 SHANK2Q9UPX8 1470 aa1.55□□□□□ -2.16
SCFD1-208ENST00000553278 KDM5AP29375 1690 aaKnown RBP1.55□□□□□ -2.16
SCFD1-208ENST00000553278 G3V318 75 aa1.54□□□□□ -2.16
SCFD1-208ENST00000553278 NDUFC1O43677 76 aa1.54□□□□□ -2.16
SCFD1-208ENST00000553278 CADP27708 2225 aa1.53□□□□□ -2.16
SCFD1-208ENST00000553278 KIF21AQ7Z4S6 1674 aa1.53□□□□□ -2.16
SCFD1-208ENST00000553278 FAIMQ9NVQ4 179 aa1.53□□□□□ -2.16
SCFD1-208ENST00000553278 TOP2BQ02880 1626 aa1.52□□□□□ -2.17
SCFD1-208ENST00000553278 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
SCFD1-208ENST00000553278 ARL2-SNX15V9GYD0 113 aa1.52□□□□□ -2.17
SCFD1-208ENST00000553278 ANKRD26Q9UPS8 1709 aa1.52□□□□□ -2.17
SCFD1-208ENST00000553278 EHBP1L1Q8N3D4 1523 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 ANKRD36BQ8N2N9 1353 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 NMBP08949 121 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 SFTA2Q6UW10 78 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 FAM103A1Q9BTL3 118 aaKnown RBP1.51□□□□□ -2.17
SCFD1-208ENST00000553278 ZNF236Q9UL36 1845 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
SCFD1-208ENST00000553278 PRDM15P57071 1507 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-208ENST00000553278 NSD3Q9BZ95 1437 aa1.5□□□□□ -2.17
SCFD1-208ENST00000553278 ATOX1O00244 68 aa1.5□□□□□ -2.17
SCFD1-208ENST00000553278 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-208ENST00000553278 UBE2DNLQ8IWF7 75 aa1.5□□□□□ -2.17
SCFD1-208ENST00000553278 ARHGEF5Q12774 1597 aa1.5□□□□□ -2.17
SCFD1-208ENST00000553278 MAGI1Q96QZ7 1491 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-208ENST00000553278 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
SCFD1-208ENST00000553278 LRRC37A2A6NM11 1700 aa1.49□□□□□ -2.17
SCFD1-208ENST00000553278 MGPP08493 103 aa1.49□□□□□ -2.17
SCFD1-208ENST00000553278 FAM223AQ8IWN6 122 aa1.49□□□□□ -2.17
SCFD1-208ENST00000553278 HMGXB3Q12766 1538 aa1.49□□□□□ -2.17
SCFD1-208ENST00000553278 TENM1Q9UKZ4 2725 aa1.48□□□□□ -2.17
SCFD1-208ENST00000553278 SBF2Q86WG5 1849 aa1.48□□□□□ -2.17
SCFD1-208ENST00000553278 IGLC1P0CG04 106 aa1.48□□□□□ -2.17
SCFD1-208ENST00000553278 SPINK7P58062 85 aa1.48□□□□□ -2.17
SCFD1-208ENST00000553278 TTC37Q6PGP7 1564 aa1.47□□□□□ -2.17
SCFD1-208ENST00000553278 Q9H521 79 aa1.47□□□□□ -2.17
SCFD1-208ENST00000553278 TROQ12816 1431 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-208ENST00000553278 SAA2P0DJI9 122 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-208ENST00000553278 MLH3Q9UHC1 1453 aa1.45□□□□□ -2.18
SCFD1-208ENST00000553278 SERP2Q8N6R1 65 aa1.45□□□□□ -2.18
SCFD1-208ENST00000553278 TRGV9Q99603 122 aa1.45□□□□□ -2.18
SCFD1-208ENST00000553278 CACFD1Q9UGQ2 172 aa1.45□□□□□ -2.18
SCFD1-208ENST00000553278 A0A0G2JND7 137 aa1.44□□□□□ -2.18
SCFD1-208ENST00000553278 HAMPP81172 84 aa1.44□□□□□ -2.18
SCFD1-208ENST00000553278 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
SCFD1-208ENST00000553278 LINC00472Q9H8W2 130 aa1.44□□□□□ -2.18
SCFD1-208ENST00000553278 RAPGEF6Q8TEU7 1601 aa1.44□□□□□ -2.18
SCFD1-208ENST00000553278 ASIPP42127 132 aa1.43□□□□□ -2.18
SCFD1-208ENST00000553278 ASXL3Q9C0F0 2248 aa1.43□□□□□ -2.18
SCFD1-208ENST00000553278 ADGRL2O95490 1459 aa1.43□□□□□ -2.18
SCFD1-208ENST00000553278 WNK3Q9BYP7 1800 aa1.43□□□□□ -2.18
SCFD1-208ENST00000553278 UNC13BO14795 1591 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 A0A1B0GWA3 101 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 FAM223BA6NKX1 122 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 M0R3E3 92 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 FAUP35544 74 aaKnown RBP1.42□□□□□ -2.18
SCFD1-208ENST00000553278 GNG2P59768 71 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 Q6JHZ5 121 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 V9GYS6 101 aa1.42□□□□□ -2.18
SCFD1-208ENST00000553278 BTAF1O14981 1849 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 ZNF815PA8K554 130 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 PMCHL1Q16048 86 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 BAZ1AQ9NRL2 1556 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-208ENST00000553278 SCN7AQ01118 1682 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 COL4A6Q14031 1691 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 KDM3BQ7LBC6 1761 aa1.41□□□□□ -2.18
SCFD1-208ENST00000553278 TRBV7-7A0A0K0K1E9 115 aa1.4□□□□□ -2.19
SCFD1-208ENST00000553278 S100A3P33764 101 aa1.4□□□□□ -2.19
SCFD1-208ENST00000553278 COX6A2Q02221 97 aa1.4□□□□□ -2.19
SCFD1-208ENST00000553278 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
SCFD1-208ENST00000553278 PLEKHH2Q8IVE3 1493 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 RAPGEF2Q9Y4G8 1499 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 TRBV25-1A0A075B6N4 114 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 C10orf142B7Z368 130 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 H7BZZ5 65 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 UQCRHP07919 91 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 TMEM263Q8WUH6 116 aaKnown RBP1.39□□□□□ -2.19
SCFD1-208ENST00000553278 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
SCFD1-208ENST00000553278 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms