RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CDC42SE2Q9NRR3 84 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 MYO7AQ13402 2215 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 ZNF815PA8K554 130 aa0.71□□□□□ -2.3
SNRPF-202ENST00000549580 ACBD7Q8N6N7 88 aa0.71□□□□□ -2.3
SNRPF-202ENST00000549580 MYOM1P52179 1685 aa0.71□□□□□ -2.3
SNRPF-202ENST00000549580 KIF21AQ7Z4S6 1674 aa0.71□□□□□ -2.3
SNRPF-202ENST00000549580 ZNF236Q9UL36 1845 aa0.71□□□□□ -2.3
SNRPF-202ENST00000549580 LRRC37A2A6NM11 1700 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 TET3O43151 1660 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 TRAV22A0A0B4J277 110 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 CRYM-AS1A6NIL9 109 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 COX6CP09669 75 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 S100A10P60903 97 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 HAMPP81172 84 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 SPINK6Q6UWN8 80 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 NXT2Q9NPJ8 142 aaKnown RBP0.7□□□□□ -2.3
SNRPF-202ENST00000549580 PRO1854Q9UHT4 67 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 CC2D2AQ9P2K1 1620 aa0.7□□□□□ -2.3
SNRPF-202ENST00000549580 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
SNRPF-202ENST00000549580 A0A0D9SFI3 127 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 PRH1P02810 166 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 TRAPPC2P0DI81 140 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 TRAPPC2BP0DI82 140 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 S100A3P33764 101 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 FAIMQ9NVQ4 179 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 CNTLNQ9NXG0 1405 aa0.69□□□□□ -2.3
SNRPF-202ENST00000549580 MGPP08493 103 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 UBE2D3P61077 147 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 UBE2D2P62837 147 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 ARL2-SNX15V9GYD0 113 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 SBF2Q86WG5 1849 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 WNK3Q9BYP7 1800 aa0.68□□□□□ -2.3
SNRPF-202ENST00000549580 KDM5AP29375 1690 aaKnown RBP0.68□□□□□ -2.3
SNRPF-202ENST00000549580 hADV29S1A0JD25 119 aa0.67□□□□□ -2.3
SNRPF-202ENST00000549580 SMR3AQ99954 134 aa0.67□□□□□ -2.3
SNRPF-202ENST00000549580 KDM3BQ7LBC6 1761 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 IGLC1P0CG04 106 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 SEC11AP67812 179 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 Q6JHZ5 121 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 SFTA2Q6UW10 78 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 AP4S1Q9Y587 144 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 ABCA3Q99758 1704 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 MRC2Q9UBG0 1479 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 SHANK2Q9UPX8 1470 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 PLXNB2O15031 1838 aa0.66□□□□□ -2.3
SNRPF-202ENST00000549580 ABCC5O15440 1437 aa0.65□□□□□ -2.3
SNRPF-202ENST00000549580 HMGXB3Q12766 1538 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 RAPGEF6Q8TEU7 1601 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 M0R143 59 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 GNGT2O14610 69 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 FAM223AQ8IWN6 122 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 ARHGEF5Q12774 1597 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 TOPAZ1Q8N9V7 1692 aa0.65□□□□□ -2.31
SNRPF-202ENST00000549580 EHBP1L1Q8N3D4 1523 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 S100A8P05109 93 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 KRTAP2-3P0C7H8 128 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 LINC00032P0C843 101 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 KRTAP2-4Q9BYR9 128 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 KRTAP2-1Q9BYU5 128 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 LRP6O75581 1613 aa0.64□□□□□ -2.31
SNRPF-202ENST00000549580 MEGF8Q7Z7M0 2845 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 ERCC6L2Q5T890 1561 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 DIP2CQ9Y2E4 1556 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 M0R3E3 92 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 NDUFC1O43677 76 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 NCMAPQ5T1S8 102 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 TMEM263Q8WUH6 116 aaKnown RBP0.63□□□□□ -2.31
SNRPF-202ENST00000549580 SPCS1Q9Y6A9 102 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 CHD1O14646 1710 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 TOP2BQ02880 1626 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 VPS8Q8N3P4 1428 aa0.63□□□□□ -2.31
SNRPF-202ENST00000549580 CACNA1HO95180 2353 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 BCE1O60756 84 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 MPC2O95563 127 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 SAA2P0DJI9 122 aaPredicted RBP0.62□□□□□ -2.31
SNRPF-202ENST00000549580 UBA52P62987 128 aaKnown RBP0.62□□□□□ -2.31
SNRPF-202ENST00000549580 SPRR4Q96PI1 79 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 DPY30Q9C005 99 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 TNCP24821 2201 aa0.62□□□□□ -2.31
SNRPF-202ENST00000549580 ASXL3Q9C0F0 2248 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 A0A1B0GWA3 101 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 MT-ATP8P03928 68 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 PMCHL2Q9BQD1 86 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 PRO0255Q9UI72 69 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 TTC28Q96AY4 2481 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 BTAF1O14981 1849 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 TEX14Q8IWB6 1497 aa0.61□□□□□ -2.31
SNRPF-202ENST00000549580 FAM223BA6NKX1 122 aa0.6□□□□□ -2.31
SNRPF-202ENST00000549580 GAPVD1Q14C86 1478 aa0.6□□□□□ -2.31
SNRPF-202ENST00000549580 FYCO1Q9BQS8 1478 aa0.6□□□□□ -2.31
SNRPF-202ENST00000549580 APCP25054 2843 aa0.6□□□□□ -2.31
SNRPF-202ENST00000549580 BDP1A6H8Y1 2624 aa0.59□□□□□ -2.31
SNRPF-202ENST00000549580 PRDM15P57071 1507 aaPredicted RBP0.59□□□□□ -2.32
SNRPF-202ENST00000549580 C10orf142B7Z368 130 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 ATOX1O00244 68 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 PKIAP61925 76 aa0.58□□□□□ -2.32
SNRPF-202ENST00000549580 Q5BKY6 102 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms