RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SMAGPQ0VAQ4 97 aa10.33□□□□□ -0.76
DDX54-204ENST00000546898 PPBPP02775 128 aa10.32□□□□□ -0.76
DDX54-204ENST00000546898 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
DDX54-204ENST00000546898 GAGE12HA6NDE8 117 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 D6R8Y8 96 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 PHOX2AO14813 284 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 C9orf163Q8N9P6 203 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 CHCHD10Q8WYQ3 142 aaPredicted RBP10.31□□□□□ -0.76
DDX54-204ENST00000546898 FAT1Q14517 4588 aa10.31□□□□□ -0.76
DDX54-204ENST00000546898 VPS13BQ7Z7G8 4022 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
DDX54-204ENST00000546898 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 TMEM18Q96B42 140 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
DDX54-204ENST00000546898 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
DDX54-204ENST00000546898 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
DDX54-204ENST00000546898 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
DDX54-204ENST00000546898 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
DDX54-204ENST00000546898 CHAC1Q9BUX1 264 aa10.29□□□□□ -0.76
DDX54-204ENST00000546898 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
DDX54-204ENST00000546898 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
DDX54-204ENST00000546898 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
DDX54-204ENST00000546898 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
DDX54-204ENST00000546898 TMEM218A2RU14 115 aa10.27□□□□□ -0.77
DDX54-204ENST00000546898 NPYP01303 97 aa10.27□□□□□ -0.77
DDX54-204ENST00000546898 ADCYAP1P18509 176 aa10.27□□□□□ -0.77
DDX54-204ENST00000546898 SS18Q15532 418 aa10.27□□□□□ -0.77
DDX54-204ENST00000546898 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
DDX54-204ENST00000546898 CCL25O15444 150 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 FOXI1Q12951 378 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 LAMTOR2Q9Y2Q5 125 aa10.26□□□□□ -0.77
DDX54-204ENST00000546898 INAFM2P0DMQ5 153 aa10.25□□□□□ -0.77
DDX54-204ENST00000546898 XCL1P47992 114 aa10.25□□□□□ -0.77
DDX54-204ENST00000546898 SEC11CQ9BY50 192 aa10.25□□□□□ -0.77
DDX54-204ENST00000546898 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
DDX54-204ENST00000546898 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
DDX54-204ENST00000546898 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
DDX54-204ENST00000546898 CIRBP-AS1Q8TBR5 109 aa10.24□□□□□ -0.77
DDX54-204ENST00000546898 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
DDX54-204ENST00000546898 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
DDX54-204ENST00000546898 IGHV3-64A0A075B6Q5 118 aa10.23□□□□□ -0.77
DDX54-204ENST00000546898 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
DDX54-204ENST00000546898 SDIM1Q6ZPB5 146 aa10.23□□□□□ -0.77
DDX54-204ENST00000546898 COMMD7Q86VX2 200 aa10.23□□□□□ -0.77
DDX54-204ENST00000546898 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
DDX54-204ENST00000546898 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 PRSS47A8MTI9 375 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 C1orf196B1AJZ1 125 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 SLPIP03973 132 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 Q6ZUT4 128 aa10.22□□□□□ -0.77
DDX54-204ENST00000546898 RAB5AP20339 215 aa10.21□□□□□ -0.77
DDX54-204ENST00000546898 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
DDX54-204ENST00000546898 MAP1LC3AQ9H492 121 aa10.21□□□□□ -0.77
DDX54-204ENST00000546898 RNASE13Q5GAN3 156 aaKnown RBP10.2□□□□□ -0.78
DDX54-204ENST00000546898 MRPS36P82909 103 aaKnown RBP10.19□□□□□ -0.78
DDX54-204ENST00000546898 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
DDX54-204ENST00000546898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.19□□□□□ -0.78
DDX54-204ENST00000546898 TRAV13-1A0A0B4J241 112 aa10.18□□□□□ -0.78
DDX54-204ENST00000546898 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
DDX54-204ENST00000546898 K7EMI3 77 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 COX7A2LO14548 114 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 S100PP25815 95 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 IFI27P40305 119 aaPredicted RBP10.17□□□□□ -0.78
DDX54-204ENST00000546898 C10orf91Q5T1B1 145 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 Q8N8P6 123 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 PKIGQ9Y2B9 76 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
DDX54-204ENST00000546898 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
DDX54-204ENST00000546898 PANO1I0J062 215 aa10.16□□□□□ -0.78
DDX54-204ENST00000546898 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
DDX54-204ENST00000546898 MALP21145 153 aa10.16□□□□□ -0.78
DDX54-204ENST00000546898 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
DDX54-204ENST00000546898 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
DDX54-204ENST00000546898 RHEBQ15382 184 aa10.15□□□□□ -0.78
DDX54-204ENST00000546898 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.78
DDX54-204ENST00000546898 SPACA4Q8TDM5 124 aa10.15□□□□□ -0.78
DDX54-204ENST00000546898 DMBT1Q9UGM3 2413 aaPredicted RBP10.15□□□□□ -0.79
DDX54-204ENST00000546898 IFITM10A6NMD0 228 aa10.14□□□□□ -0.79
DDX54-204ENST00000546898 APOMO95445 188 aa10.14□□□□□ -0.79
DDX54-204ENST00000546898 COX19Q49B96 90 aa10.14□□□□□ -0.79
DDX54-204ENST00000546898 CARD19Q96LW7 228 aa10.14□□□□□ -0.79
DDX54-204ENST00000546898 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
DDX54-204ENST00000546898 CYSLTR1Q9Y271 337 aa10.14□□□□□ -0.79
DDX54-204ENST00000546898 COX6A2Q02221 97 aa10.13□□□□□ -0.79
DDX54-204ENST00000546898 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
DDX54-204ENST00000546898 GNB1LQ9BYB4 327 aa10.13□□□□□ -0.79
DDX54-204ENST00000546898 HERC1Q15751 4861 aa10.13□□□□□ -0.79
DDX54-204ENST00000546898 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 CHTF8P0CG12 524 aa10.12□□□□□ -0.79
DDX54-204ENST00000546898 SYCNQ0VAF6 134 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms