RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 RPL18AQ02543 176 aaKnown RBP9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 UPK3BQ9BT76 320 aa9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 Q6YL49 198 aa9.02□□□□□ -0.96
NPC1L1-204ENST00000546276 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 UBE2BP63146 152 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 KLK12Q9UKR0 248 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 DCANP1Q8TF63 244 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 J3QKU1 62 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.97
NPC1L1-204ENST00000546276 BPTFQ12830 3046 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 IGLV2-18A0A075B6J9 118 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 UBE2D3P61077 147 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 UBE2D2P62837 147 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 CENPFP49454 3210 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 CCDC179H3BU77 68 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 ARHGAP32A7KAX9 2087 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 SLPIP03973 132 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 DEFB135Q30KP9 77 aa9.01□□□□□ -0.97
NPC1L1-204ENST00000546276 PCNTO95613 3336 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 IGLV1-40P01703 118 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 DEFB4AO15263 64 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 COX7BP24311 80 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 Q6Q795 121 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 SORL1Q92673 2214 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 IGF2RP11717 2491 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 C20orf197Q8N268 126 aa9□□□□□ -0.97
NPC1L1-204ENST00000546276 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
NPC1L1-204ENST00000546276 PTPN13Q12923 2485 aa8.99□□□□□ -0.97
NPC1L1-204ENST00000546276 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
NPC1L1-204ENST00000546276 TSPEAR-AS2P59090 65 aa8.99□□□□□ -0.97
NPC1L1-204ENST00000546276 MRGPRG-AS1Q2M3A8 158 aa8.99□□□□□ -0.97
NPC1L1-204ENST00000546276 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 DNAJC9-AS1A6NH13 148 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 NDUFA7O95182 113 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 POM121L12Q8N7R1 296 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 REG3AQ06141 175 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
NPC1L1-204ENST00000546276 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
NPC1L1-204ENST00000546276 CLUHP3Q96NS8 147 aa8.97□□□□□ -0.97
NPC1L1-204ENST00000546276 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
NPC1L1-204ENST00000546276 UTRNP46939 3433 aa8.97□□□□□ -0.97
NPC1L1-204ENST00000546276 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
NPC1L1-204ENST00000546276 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.97
NPC1L1-204ENST00000546276 NDUFC2O95298 119 aa8.96□□□□□ -0.98
NPC1L1-204ENST00000546276 IGHV4-31P0DP07 118 aa8.96□□□□□ -0.98
NPC1L1-204ENST00000546276 MP68P56378 58 aa8.95□□□□□ -0.98
NPC1L1-204ENST00000546276 SERP2Q8N6R1 65 aa8.95□□□□□ -0.98
NPC1L1-204ENST00000546276 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 PRM2P04554 102 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 USP17L23D6RBM5 183 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 COX7CP15954 63 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 ZNF702PQ9H963 129 aa8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 TLN1Q9Y490 2541 aaKnown RBP8.94□□□□□ -0.98
NPC1L1-204ENST00000546276 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
NPC1L1-204ENST00000546276 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
NPC1L1-204ENST00000546276 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
NPC1L1-204ENST00000546276 TET2Q6N021 2002 aaPredicted RBP8.93□□□□□ -0.98
NPC1L1-204ENST00000546276 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 BPY2O14599 106 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 CDSNQ15517 529 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 HIVEP2P31629 2446 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 LINC01546A6NGU7 62 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 LINC00242Q5T6M2 205 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 WFDC9Q8NEX5 89 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 WFDC11Q8NEX6 87 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 EDN2P20800 178 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 PRORYQ9H606 182 aa8.92□□□□□ -0.98
NPC1L1-204ENST00000546276 Q6ZSV7 163 aa8.91□□□□□ -0.98
NPC1L1-204ENST00000546276 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
NPC1L1-204ENST00000546276 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
NPC1L1-204ENST00000546276 CCL18P55774 89 aa8.91□□□□□ -0.98
NPC1L1-204ENST00000546276 LRRC75A-AS1Q8N1F1 130 aa8.91□□□□□ -0.98
NPC1L1-204ENST00000546276 NAV2Q8IVL1 2488 aa8.9□□□□□ -0.98
NPC1L1-204ENST00000546276 AMELXQ99217 191 aa8.9□□□□□ -0.98
NPC1L1-204ENST00000546276 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
NPC1L1-204ENST00000546276 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.99
NPC1L1-204ENST00000546276 CHCHD7Q9BUK0 85 aa8.9□□□□□ -0.99
NPC1L1-204ENST00000546276 NDUFS5O43920 106 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 Q6JHZ5 121 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 C18orf65Q6ZTR6 163 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 ZNF580Q9UK33 172 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 LOC100131303A0A0U1RQF7 123 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 SCXQ7RTU7 201 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 MYO9AB2RTY4 2548 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
NPC1L1-204ENST00000546276 BRI3O95415 125 aa8.88□□□□□ -0.99
NPC1L1-204ENST00000546276 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
NPC1L1-204ENST00000546276 M0QXV9 152 aa8.88□□□□□ -0.99
NPC1L1-204ENST00000546276 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
NPC1L1-204ENST00000546276 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
NPC1L1-204ENST00000546276 NDUFB1O75438 58 aa8.87□□□□□ -0.99
NPC1L1-204ENST00000546276 XAGE1AQ9HD64 81 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms